Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 AL158211.5-201ENST00000623583 2518 ntBASIC20.83■□□□□ 0.92
COL1A2P08123 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.83■□□□□ 0.92
COL1A2P08123 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.83■□□□□ 0.92
COL1A2P08123 RASA4DP-201ENST00000460726 1199 ntBASIC20.83■□□□□ 0.92
COL1A2P08123 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.83■□□□□ 0.92
COL1A2P08123 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.83■□□□□ 0.92
COL1A2P08123 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.83■□□□□ 0.92
COL1A2P08123 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL1A2P08123 AC116407.4-201ENST00000623319 1061 ntBASIC20.83■□□□□ 0.92
COL1A2P08123 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.83■□□□□ 0.92
COL1A2P08123 IER3-202ENST00000376377 1350 ntBASIC20.83■□□□□ 0.92
COL1A2P08123 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL1A2P08123 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.82■□□□□ 0.92
COL1A2P08123 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.82■□□□□ 0.92
COL1A2P08123 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 SEC1P-202ENST00000473944 940 ntBASIC20.82■□□□□ 0.92
COL1A2P08123 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.82■□□□□ 0.92
COL1A2P08123 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.82■□□□□ 0.92
COL1A2P08123 AC024243.1-201ENST00000609234 778 ntBASIC20.82■□□□□ 0.92
COL1A2P08123 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
COL1A2P08123 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.82■□□□□ 0.92
COL1A2P08123 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.82■□□□□ 0.92
COL1A2P08123 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 LINC01311-201ENST00000565162 1445 ntBASIC20.82■□□□□ 0.92
COL1A2P08123 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.82■□□□□ 0.92
COL1A2P08123 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.82■□□□□ 0.92
COL1A2P08123 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A2P08123 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A2P08123 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A2P08123 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A2P08123 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 KRT8P32-201ENST00000512863 1461 ntBASIC20.81■□□□□ 0.92
COL1A2P08123 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COL1A2P08123 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A2P08123 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
COL1A2P08123 AC112497.1-201ENST00000624824 639 ntBASIC20.81■□□□□ 0.92
COL1A2P08123 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL1A2P08123 KRT8P7-201ENST00000533003 1432 ntBASIC20.8■□□□□ 0.92
COL1A2P08123 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A2P08123 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A2P08123 HBZP1-201ENST00000354915 429 ntBASIC20.8■□□□□ 0.92
COL1A2P08123 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A2P08123 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.8■□□□□ 0.92
COL1A2P08123 VENTXP5-201ENST00000523979 775 ntBASIC20.8■□□□□ 0.92
COL1A2P08123 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.8■□□□□ 0.92
COL1A2P08123 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
COL1A2P08123 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.79■□□□□ 0.92
COL1A2P08123 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
COL1A2P08123 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL1A2P08123 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
COL1A2P08123 PCDHAC2-203ENST00000615316 3011 ntBASIC20.79■□□□□ 0.92
COL1A2P08123 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.79■□□□□ 0.92
COL1A2P08123 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.79■□□□□ 0.92
COL1A2P08123 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A2P08123 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.79■□□□□ 0.92
COL1A2P08123 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
COL1A2P08123 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL1A2P08123 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms