Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-562P-201ENST00000362731 107 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU6-128P-201ENST00000383976 107 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU6-95P-201ENST00000384697 107 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL353621.1-201ENST00000418219 243 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL139396.1-201ENST00000421137 167 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 BX276092.3-201ENST00000424182 230 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RPL30P4-201ENST00000429309 333 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 MTCO3P10-201ENST00000455912 772 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL583843.1-201ENST00000456070 346 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AC093303.1-201ENST00000514549 295 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1170P-201ENST00000515974 106 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU1-86P-201ENST00000516108 154 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU1-107P-201ENST00000516617 154 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1332P-201ENST00000516666 104 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AC100830.2-201ENST00000581636 240 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 MIR4435-1-201ENST00000582552 80 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AL360085.1-201ENST00000604713 532 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AC080078.3-201ENST00000605407 463 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 AC069294.1-201ENST00000608397 350 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 HMGB1P24-202ENST00000615653 685 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.63□□□□□ -1.99
DDX43Q9NXZ2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AC138393.1-203ENST00000327086 343 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MIR412-201ENST00000362142 91 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.31-201ENST00000362574 102 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.187-201ENST00000363918 113 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.197-201ENST00000364004 102 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 SNORA63C-201ENST00000364578 129 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 RNU6-738P-201ENST00000384531 106 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MIR559-201ENST00000385188 96 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 SNORA75.4-201ENST00000391278 119 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AL359511.1-201ENST00000402970 211 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 U6atac.2-201ENST00000408644 118 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MTND2P23-201ENST00000422990 651 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 PMCHL1-202ENST00000423102 261 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 SNAP23P1-201ENST00000433229 246 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AL137792.2-201ENST00000443484 235 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.631-201ENST00000459607 101 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 RPL22P13-201ENST00000493291 347 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1213P-201ENST00000517075 94 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 RNU6-323P-201ENST00000521915 107 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AC105245.1-201ENST00000581934 244 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MIR548AC-201ENST00000585049 88 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 RMST_4.1-201ENST00000616886 107 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 uc_338.22-201ENST00000622722 187 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 AC244517.12-201ENST00000623581 663 ntBASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX43Q9NXZ2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RNU6-593P-201ENST00000364716 112 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.480-201ENST00000384364 102 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RNU6-601P-201ENST00000384540 107 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RNU6-310P-201ENST00000384655 107 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.646-201ENST00000410980 101 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AL359672.1-201ENST00000442302 409 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC130509.1-201ENST00000464158 433 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 MTCYBP40-201ENST00000509390 1135 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC116337.1-201ENST00000509680 687 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC092436.3-201ENST00000511788 257 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RPL39P5-202ENST00000512505 151 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC026782.1-201ENST00000512952 449 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 MIR5571-201ENST00000577998 113 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AL031601.2-202ENST00000622650 282 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 AC138627.2-201ENST00000624202 601 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 KPNA2P1-201ENST00000458289 1591 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.61□□□□□ -1.99
DDX43Q9NXZ2 RNA5SP289-201ENST00000362332 137 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 SNORD3E-201ENST00000362899 217 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 RNU6-384P-201ENST00000364900 104 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 Y_RNA.623-201ENST00000411128 95 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AL163540.1-201ENST00000485382 386 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 RPL36AP48-201ENST00000485521 314 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 RNU6-1016P-201ENST00000516689 94 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AC087854.1-201ENST00000519706 414 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AC025423.5-201ENST00000550230 219 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 MIR5692A1-201ENST00000580523 69 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AC104984.5-201ENST00000586878 94 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 ELOCP5-201ENST00000604924 333 ntBASIC2.6□□□□□ -1.99
DDX43Q9NXZ2 AP000654.2-201ENST00000605633 586 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms