Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC093852.1-201ENST00000503587 266 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.21□□□□□ -1.9
PNKPQ96T60 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.21□□□□□ -1.9
PNKPQ96T60 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.21□□□□□ -1.9
PNKPQ96T60 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 MIR6852-201ENST00000621699 66 ntBASIC3.21□□□□□ -1.9
PNKPQ96T60 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PNKPQ96T60 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNKPQ96T60 AC110491.1-201ENST00000562191 2010 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC233981.2-201ENST00000611524 1614 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AF127577.6-201ENST00000623352 2191 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 Y_RNA.358-201ENST00000365491 99 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 Y_RNA.510-201ENST00000384511 114 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 MIR628-201ENST00000385229 95 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 MIR190B-201ENST00000401119 79 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 RNU6-1245P-201ENST00000411130 106 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AL139281.1-201ENST00000422120 335 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PNKPQ96T60 AC007969.2-201ENST00000441891 191 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
PNKPQ96T60 RNU7-87P-201ENST00000459343 62 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 SNRPGP7-201ENST00000469016 106 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.2□□□□□ -1.9
PNKPQ96T60 AC110588.1-201ENST00000559699 137 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC104581.2-201ENST00000572227 430 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC010928.2-201ENST00000588017 287 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 AC007792.1-201ENST00000623023 402 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.2□□□□□ -1.9
PNKPQ96T60 AL137790.1-201ENST00000634283 177 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
PNKPQ96T60 AC000403.1-201ENST00000613696 3585 ntBASIC3.2□□□□□ -1.9
PNKPQ96T60 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNKPQ96T60 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.19□□□□□ -1.9
PNKPQ96T60 AP000560.1-201ENST00000624150 1937 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PNKPQ96T60 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RNU6-968P-201ENST00000384076 107 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RPL21P1-201ENST00000399532 476 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 MTCYBP2-201ENST00000407745 171 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.19□□□□□ -1.9
PNKPQ96T60 AL358453.1-201ENST00000422522 250 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.19□□□□□ -1.9
PNKPQ96T60 OSTCP8-201ENST00000445117 448 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
PNKPQ96T60 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
PNKPQ96T60 AC010099.1-201ENST00000455434 375 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.19□□□□□ -1.9
PNKPQ96T60 TOMM22P6-201ENST00000465035 409 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RPL30P1-201ENST00000488676 339 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.19□□□□□ -1.9
PNKPQ96T60 RNU7-175P-201ENST00000515915 61 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RNU6-397P-201ENST00000516226 104 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RN7SKP272-201ENST00000516988 232 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 SNORA31.23-201ENST00000517219 133 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC006199.1-201ENST00000548728 219 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 RAC1P9-201ENST00000604990 392 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC100812.1-201ENST00000607622 580 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 MIR7106-201ENST00000612419 65 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AL159153.1-201ENST00000619688 317 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.19□□□□□ -1.9
PNKPQ96T60 AP001148.1-201ENST00000624124 2359 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
PNKPQ96T60 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PNKPQ96T60 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PNKPQ96T60 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.26-201ENST00000362539 101 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.214-201ENST00000364201 112 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.222-201ENST00000364264 102 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 SNORD32A-201ENST00000364805 84 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.500-201ENST00000384466 111 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.551-201ENST00000384661 102 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 MIR544A-201ENST00000384855 91 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC023141.4-201ENST00000412031 328 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 MTCO3P19-201ENST00000415864 321 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 ELOCP20-201ENST00000422460 345 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC073910.1-201ENST00000445047 438 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 MED28P2-201ENST00000475771 317 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 RPL23AP75-201ENST00000491601 451 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 RNU6-911P-201ENST00000516523 104 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 Y_RNA.706-201ENST00000516933 99 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.18□□□□□ -1.9
PNKPQ96T60 AP000867.2-201ENST00000532468 320 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
PNKPQ96T60 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
PNKPQ96T60 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
PNKPQ96T60 AC090517.1-201ENST00000569307 266 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 MYL12BP1-201ENST00000569826 507 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 AC009163.5-201ENST00000575421 637 ntBASIC3.18□□□□□ -1.9
PNKPQ96T60 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms