Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SNORD73A-201ENST00000386062 65 ntBASIC2.59□□□□□ -1.99
CD4P01730 SNORA26.3-201ENST00000391119 136 ntBASIC2.59□□□□□ -1.99
CD4P01730 EDDM3CP-201ENST00000415977 425 ntBASIC2.59□□□□□ -1.99
CD4P01730 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -1.99
CD4P01730 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
CD4P01730 MRPS10P2-201ENST00000431226 381 ntBASIC2.59□□□□□ -1.99
CD4P01730 HMGB1P18-201ENST00000438801 619 ntBASIC2.59□□□□□ -1.99
CD4P01730 HMGN2P26-201ENST00000463169 339 ntBASIC2.59□□□□□ -1.99
CD4P01730 SNRPGP7-201ENST00000469016 106 ntBASIC2.59□□□□□ -1.99
CD4P01730 AC132942.1-201ENST00000486753 483 ntBASIC2.59□□□□□ -1.99
CD4P01730 AC007375.1-201ENST00000554513 578 ntBASIC2.59□□□□□ -1.99
CD4P01730 MIR5007-201ENST00000583098 95 ntBASIC2.59□□□□□ -1.99
CD4P01730 AL136221.1-201ENST00000621449 509 ntBASIC2.59□□□□□ -1.99
CD4P01730 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
CD4P01730 MTND4P23-201ENST00000447723 1363 ntBASIC2.59□□□□□ -2
CD4P01730 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CD4P01730 Y_RNA.38-201ENST00000362617 102 ntBASIC2.58□□□□□ -2
CD4P01730 RNU6-227P-201ENST00000362865 103 ntBASIC2.58□□□□□ -2
CD4P01730 Y_RNA.256-201ENST00000364594 104 ntBASIC2.58□□□□□ -2
CD4P01730 AL590135.1-201ENST00000422215 156 ntBASIC2.58□□□□□ -2
CD4P01730 AC019205.3-201ENST00000424573 156 ntBASIC2.58□□□□□ -2
CD4P01730 AC016700.2-201ENST00000446011 156 ntBASIC2.58□□□□□ -2
CD4P01730 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.58□□□□□ -2
CD4P01730 AC245102.2-201ENST00000448956 180 ntBASIC2.58□□□□□ -2
CD4P01730 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.58□□□□□ -2
CD4P01730 AC015911.1-201ENST00000495111 156 ntBASIC2.58□□□□□ -2
CD4P01730 AC008628.2-201ENST00000502605 298 ntBASIC2.58□□□□□ -2
CD4P01730 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
CD4P01730 RNU6-548P-201ENST00000517083 115 ntBASIC2.58□□□□□ -2
CD4P01730 SCOCP1-201ENST00000554676 349 ntBASIC2.58□□□□□ -2
CD4P01730 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
CD4P01730 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CD4P01730 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
CD4P01730 MIR450B-201ENST00000401182 78 ntBASIC2.57□□□□□ -2
CD4P01730 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.57□□□□□ -2
CD4P01730 AC009161.1-201ENST00000417306 376 ntBASIC2.57□□□□□ -2
CD4P01730 ZNF885P-201ENST00000420174 1098 ntBASIC2.57□□□□□ -2
CD4P01730 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.57□□□□□ -2
CD4P01730 AL031659.1-201ENST00000447075 539 ntBASIC2.57□□□□□ -2
CD4P01730 HMGN2P23-201ENST00000456759 269 ntBASIC2.57□□□□□ -2
CD4P01730 AC018868.1-201ENST00000491307 315 ntBASIC2.57□□□□□ -2
CD4P01730 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.57□□□□□ -2
CD4P01730 Y_RNA.665-201ENST00000516177 98 ntBASIC2.57□□□□□ -2
CD4P01730 RNU6-612P-201ENST00000516909 102 ntBASIC2.57□□□□□ -2
CD4P01730 HSPE1P18-201ENST00000517602 280 ntBASIC2.57□□□□□ -2
CD4P01730 MIR3923-201ENST00000579521 83 ntBASIC2.57□□□□□ -2
CD4P01730 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
CD4P01730 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
CD4P01730 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.57□□□□□ -2
CD4P01730 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.57□□□□□ -2
CD4P01730 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CD4P01730 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
CD4P01730 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.56□□□□□ -2
CD4P01730 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.56□□□□□ -2
CD4P01730 RNU6-1090P-201ENST00000364065 94 ntBASIC2.56□□□□□ -2
CD4P01730 Y_RNA.373-201ENST00000365600 103 ntBASIC2.56□□□□□ -2
CD4P01730 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
CD4P01730 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.56□□□□□ -2
CD4P01730 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
CD4P01730 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD4P01730 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.56□□□□□ -2
CD4P01730 AC104564.1-201ENST00000493028 407 ntBASIC2.56□□□□□ -2
CD4P01730 MTCO1P29-201ENST00000496868 288 ntBASIC2.56□□□□□ -2
CD4P01730 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
CD4P01730 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
CD4P01730 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.56□□□□□ -2
CD4P01730 TRAV32-201ENST00000553993 340 ntBASIC2.56□□□□□ -2
CD4P01730 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.56□□□□□ -2
CD4P01730 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.56□□□□□ -2
CD4P01730 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
CD4P01730 Y_RNA.89-201ENST00000363031 102 ntBASIC2.55□□□□□ -2
CD4P01730 RNU6-933P-201ENST00000384424 107 ntBASIC2.55□□□□□ -2
CD4P01730 Y_RNA.554-201ENST00000384672 102 ntBASIC2.55□□□□□ -2
CD4P01730 SNORA64-201ENST00000384674 134 ntBASIC2.55□□□□□ -2
CD4P01730 MTCYBP2-201ENST00000407745 171 ntBASIC2.55□□□□□ -2
CD4P01730 MIR1294-201ENST00000408503 142 ntBASIC2.55□□□□□ -2
CD4P01730 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.55□□□□□ -2
CD4P01730 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.55□□□□□ -2
CD4P01730 GPM6BP3-201ENST00000442797 145 ntBASIC2.55□□□□□ -2
CD4P01730 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.55□□□□□ -2
CD4P01730 AC007547.1-201ENST00000462177 490 ntBASIC2.55□□□□□ -2
CD4P01730 RPL9P9-202ENST00000466501 579 ntBASIC2.55□□□□□ -2
CD4P01730 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.55□□□□□ -2
CD4P01730 AC083904.1-201ENST00000487828 231 ntBASIC2.55□□□□□ -2
CD4P01730 AC082651.2-201ENST00000496833 166 ntBASIC2.55□□□□□ -2
CD4P01730 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
CD4P01730 AC026371.1-201ENST00000551867 419 ntBASIC2.55□□□□□ -2
CD4P01730 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.55□□□□□ -2
CD4P01730 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.55□□□□□ -2
CD4P01730 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.55□□□□□ -2
CD4P01730 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
CD4P01730 AC090517.2-201ENST00000614966 680 ntBASIC2.55□□□□□ -2
CD4P01730 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CD4P01730 AC009541.1-201ENST00000438279 2662 ntBASIC2.54□□□□□ -2
CD4P01730 RNU6-254P-201ENST00000363377 107 ntBASIC2.54□□□□□ -2
CD4P01730 Y_RNA.157-201ENST00000363638 102 ntBASIC2.54□□□□□ -2
CD4P01730 RNU6-944P-201ENST00000364023 107 ntBASIC2.54□□□□□ -2
CD4P01730 Y_RNA.453-201ENST00000384223 109 ntBASIC2.54□□□□□ -2
CD4P01730 AL645568.3-201ENST00000433683 316 ntBASIC2.54□□□□□ -2
CD4P01730 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms