Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR7106-201ENST00000612419 65 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.55□□□□□ -2
LRRC53A6NM62 AC092794.2-201ENST00000620933 563 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.55□□□□□ -2
LRRC53A6NM62 MIR1291-201ENST00000627649 87 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 SNORD98-201ENST00000636377 67 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 TPTEP1-208ENST00000636884 213 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AL450472.1-202ENST00000637286 180 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.55□□□□□ -2
LRRC53A6NM62 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LRRC53A6NM62 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.54□□□□□ -2
LRRC53A6NM62 SNORA36A-201ENST00000384221 132 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC074085.1-201ENST00000413598 418 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AL590135.1-201ENST00000422215 156 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.54□□□□□ -2
LRRC53A6NM62 AC019205.3-201ENST00000424573 156 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC078809.1-201ENST00000427601 140 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 RPL23AP83-201ENST00000434984 473 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 RPS3AP52-201ENST00000435639 297 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
LRRC53A6NM62 AC016700.2-201ENST00000446011 156 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 FTH1P25-201ENST00000447665 469 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
LRRC53A6NM62 AC015911.1-201ENST00000495111 156 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.54□□□□□ -2
LRRC53A6NM62 RNU6-507P-201ENST00000516045 100 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 LARP7P3-201ENST00000579888 337 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 POLR3GP2-201ENST00000588366 668 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
LRRC53A6NM62 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.54□□□□□ -2
LRRC53A6NM62 AC078795.3-201ENST00000602913 472 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AL138963.2-201ENST00000605137 226 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC018889.1-201ENST00000605372 397 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 MIR5739-201ENST00000619803 80 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
LRRC53A6NM62 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LRRC53A6NM62 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC53A6NM62 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRRC53A6NM62 AP000560.1-201ENST00000624150 1937 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.53□□□□□ -2
LRRC53A6NM62 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 MTND5P20-201ENST00000448677 143 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC107399.1-201ENST00000451226 265 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 MTND4P17-201ENST00000470444 350 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC104564.1-201ENST00000493028 407 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC016632.1-201ENST00000503994 196 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 Y_RNA.691-201ENST00000516611 103 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 RNU1-54P-201ENST00000517181 120 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
LRRC53A6NM62 AL078605.1-201ENST00000603529 500 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
LRRC53A6NM62 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LRRC53A6NM62 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
LRRC53A6NM62 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 Y_RNA.142-201ENST00000363491 102 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNU6-1059P-201ENST00000363752 98 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNA5SP184-201ENST00000411071 108 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC096664.2-201ENST00000411843 406 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 USP9YP30-201ENST00000430729 455 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 DAP3P1-201ENST00000441522 278 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 MTND4P18-201ENST00000447010 465 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC116337.1-201ENST00000509680 687 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 RNU6-875P-201ENST00000516488 106 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC134698.4-201ENST00000523451 826 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LRRC53A6NM62 MRPS36P4-201ENST00000534436 298 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.52□□□□□ -2.01
LRRC53A6NM62 IMMP1LP2-201ENST00000552954 492 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AC243960.4-201ENST00000600532 288 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.52□□□□□ -2.01
LRRC53A6NM62 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC53A6NM62 AC092268.1-201ENST00000342691 405 ntBASIC2.51□□□□□ -2.01
LRRC53A6NM62 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
LRRC53A6NM62 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms