Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MTND4P4-201ENST00000439033 1366 ntBASIC1.33□□□□□ -2.2
CCNB1IP1Q9NPC3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORD32A-201ENST00000364805 84 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AC108210.2-201ENST00000503681 201 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA3.4-201ENST00000515969 96 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA31.16-201ENST00000516773 139 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AL160236.1-201ENST00000556317 195 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AL590229.1-201ENST00000603497 542 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 AC012507.3-201ENST00000603556 477 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 U6.114-201ENST00000636407 96 ntBASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCNB1IP1Q9NPC3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-271P-201ENST00000363858 105 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-74P-201ENST00000384235 107 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA26.3-201ENST00000391119 136 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RPS29P13-201ENST00000402041 169 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RN7SKP61-201ENST00000410642 295 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RPS3AP3-201ENST00000411933 242 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 MTCO3P41-201ENST00000414801 328 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AL590135.1-201ENST00000422215 156 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC011233.1-201ENST00000422812 283 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC019205.3-201ENST00000424573 156 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC078809.1-201ENST00000427601 140 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 C8orf59P1-201ENST00000429930 303 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AL121601.2-201ENST00000438019 707 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC016700.2-201ENST00000446011 156 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC079781.2-201ENST00000446424 169 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 SNRPFP4-201ENST00000456366 242 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC015911.1-201ENST00000495111 156 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORD27.1-201ENST00000516319 72 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC015720.1-201ENST00000565251 277 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR4775-201ENST00000581168 75 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AC098848.2-201ENST00000588023 330 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 BNIP3P39-201ENST00000601077 554 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AL356157.2-201ENST00000605122 111 ntBASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCNB1IP1Q9NPC3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-428P-201ENST00000362942 107 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR454-201ENST00000390180 115 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 AC139712.2-201ENST00000424302 339 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 RPS27AP8-201ENST00000452665 445 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 AL162395.1-201ENST00000457882 422 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 MTCO2P6-201ENST00000463134 685 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 RPS26P55-201ENST00000471178 356 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 SUB1P3-201ENST00000564581 315 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 BNIP3P8-201ENST00000597863 560 ntBASIC1.3□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU1-17P-201ENST00000363022 152 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 RNU6-60P-201ENST00000364792 103 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA32.2-201ENST00000384049 122 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNORA12.2-201ENST00000391040 156 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 RPL23AP95-201ENST00000426806 265 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNAP23P1-201ENST00000433229 246 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 GPR143P-201ENST00000434155 205 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 AL596276.1-201ENST00000434465 418 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 JTBP1-201ENST00000441314 247 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 SNRPEP8-201ENST00000442866 260 ntBASIC1.29□□□□□ -2.2
CCNB1IP1Q9NPC3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms