Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 snoU13.6-201ENST00000458785 104 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AC140059.1-201ENST00000489238 361 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AC005840.1-201ENST00000498412 377 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AL391261.4-201ENST00000616012 481 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 snoU18.1-201ENST00000629629 71 ntBASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC85AQ96PX6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC85AQ96PX6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.71□□□□□ -1.65
CCDC85AQ96PX6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.7-201ENST00000362352 102 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RNU6-50P-201ENST00000362356 103 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RNU4-80P-201ENST00000363200 141 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RNU6-487P-201ENST00000365430 104 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RNU6-22P-201ENST00000384355 107 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.497-201ENST00000384447 98 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RNU6-959P-201ENST00000384671 107 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 MIR7-3-201ENST00000384898 110 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 MIR513A2-201ENST00000385249 127 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 MIR199A2-201ENST00000385289 110 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 SNORA11.1-201ENST00000408133 129 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RPL23AP62-201ENST00000463396 453 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 MIR3944-201ENST00000581277 108 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 AL451007.1-201ENST00000595491 289 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 AC099654.7-201ENST00000635788 2127 ntBASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC85AQ96PX6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC068254.2-201ENST00000623938 3577 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.121-201ENST00000363309 113 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.400-201ENST00000383963 111 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 RNU6-793P-201ENST00000384233 104 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 MIR23A-201ENST00000385245 73 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 MIR320B2-201ENST00000408479 138 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 RNU5E-9P-201ENST00000411164 104 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AL160275.2-201ENST00000412010 394 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC007215.1-201ENST00000464893 276 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AL121594.1-201ENST00000475906 575 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 RNU6-313P-201ENST00000516317 112 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 RNA5SP468-201ENST00000516782 93 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC115990.1-201ENST00000526957 301 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC055872.1-201ENST00000570978 278 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 AC091895.1-201ENST00000624494 256 ntBASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC85AQ96PX6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.23-201ENST00000362496 106 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RNU6-1272P-201ENST00000362776 107 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.357-201ENST00000365487 109 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 Y_RNA.488-201ENST00000384403 102 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RAB28P5-201ENST00000427490 651 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RPL39P29-201ENST00000447779 157 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 PRSS3P4-201ENST00000453323 162 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AP000705.1-201ENST00000454567 350 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RPL26P9-201ENST00000457466 433 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RPS4XP13-201ENST00000483219 789 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RPS27AP10-201ENST00000496103 208 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AC110768.1-201ENST00000509222 400 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 HMGB3P3-201ENST00000510526 400 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RNU5F-8P-201ENST00000515941 111 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 MIR5187-201ENST00000583479 76 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 SNORA62.6-201ENST00000606322 83 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 ADAM3A-203ENST00000461344 2157 ntBASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC85AQ96PX6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC85AQ96PX6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85AQ96PX6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC85AQ96PX6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms