Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HDAC3O15379 RNU6-82P-201ENST00000363970 107 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 Y_RNA.324-201ENST00000365165 102 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 XGY1-201ENST00000381172 446 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 Y_RNA.414-201ENST00000384011 101 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 Y_RNA.529-201ENST00000384586 119 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 RNU2-41P-201ENST00000410991 178 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 MTND3P8-201ENST00000412909 339 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 AC009161.1-201ENST00000417306 376 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.01□□□□□ -2.09
HDAC3O15379 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.01□□□□□ -2.09
HDAC3O15379 HMGN2P10-201ENST00000448085 265 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.01□□□□□ -2.09
HDAC3O15379 SNORA19.2-201ENST00000516013 114 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 SNORA14.1-201ENST00000516113 141 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 Y_RNA.687-201ENST00000516558 91 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 RNU6-1069P-201ENST00000516612 133 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.01□□□□□ -2.09
HDAC3O15379 AP000763.2-201ENST00000540641 163 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 AC006199.1-201ENST00000548728 219 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 SNRPGP18-201ENST00000553000 214 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 MIR4782-201ENST00000577987 79 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 MIR4287-201ENST00000579398 78 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 MIR3672-201ENST00000584290 82 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HDAC3O15379 AC063943.3-201ENST00000615562 356 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 MIR6134-201ENST00000617606 109 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 AC110491.1-201ENST00000562191 2010 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.01□□□□□ -2.09
HDAC3O15379 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HDAC3O15379 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2□□□□□ -2.09
HDAC3O15379 CDC27P3-201ENST00000635418 1910 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNA5SP289-201ENST00000362332 137 ntBASIC2□□□□□ -2.09
HDAC3O15379 Y_RNA.100-201ENST00000363141 102 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNU6-254P-201ENST00000363377 107 ntBASIC2□□□□□ -2.09
HDAC3O15379 Y_RNA.142-201ENST00000363491 102 ntBASIC2□□□□□ -2.09
HDAC3O15379 Y_RNA.166-201ENST00000363730 102 ntBASIC2□□□□□ -2.09
HDAC3O15379 Y_RNA.301-201ENST00000364990 103 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNU6-72P-201ENST00000384285 79 ntBASIC2□□□□□ -2.09
HDAC3O15379 SNORD73A-201ENST00000386062 65 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNU6-1009P-201ENST00000390996 107 ntBASIC2□□□□□ -2.09
HDAC3O15379 MTND4P17-201ENST00000470444 350 ntBASIC2□□□□□ -2.09
HDAC3O15379 HMGB1P30-201ENST00000492455 606 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNU6-581P-201ENST00000516214 105 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNU6-864P-201ENST00000516256 108 ntBASIC2□□□□□ -2.09
HDAC3O15379 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
HDAC3O15379 RN7SKP256-201ENST00000517201 314 ntBASIC2□□□□□ -2.09
HDAC3O15379 AP005597.4-201ENST00000526762 229 ntBASIC2□□□□□ -2.09
HDAC3O15379 AC010186.2-204ENST00000537668 439 ntBASIC2□□□□□ -2.09
HDAC3O15379 MIR4529-201ENST00000578110 78 ntBASIC2□□□□□ -2.09
HDAC3O15379 FGF7P1-201ENST00000582820 288 ntBASIC2□□□□□ -2.09
HDAC3O15379 AC005261.5-201ENST00000596280 355 ntBASIC2□□□□□ -2.09
HDAC3O15379 AC005034.5-201ENST00000604219 466 ntBASIC2□□□□□ -2.09
HDAC3O15379 AC025253.1-201ENST00000613623 543 ntBASIC2□□□□□ -2.09
HDAC3O15379 AC093913.1-201ENST00000614178 329 ntBASIC2□□□□□ -2.09
HDAC3O15379 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HDAC3O15379 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
HDAC3O15379 RNU6-942P-201ENST00000363002 107 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 Y_RNA.263-201ENST00000364659 114 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 Y_RNA.356-201ENST00000365475 113 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 Y_RNA.530-201ENST00000384587 101 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 EIF4E2P1-201ENST00000393781 255 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AL512604.1-201ENST00000404812 257 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 ARL5AP1-201ENST00000418991 388 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.99□□□□□ -2.09
HDAC3O15379 AMD1P1-201ENST00000457220 922 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 PPP1R2P5-201ENST00000457256 603 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 TRBVA-201ENST00000498804 316 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 AC105029.1-201ENST00000520250 669 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 AC093027.1-201ENST00000546698 429 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 AC021739.1-201ENST00000559631 174 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.99□□□□□ -2.09
HDAC3O15379 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.99□□□□□ -2.09
HDAC3O15379 MIR4513-201ENST00000581077 86 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.99□□□□□ -2.09
HDAC3O15379 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HDAC3O15379 AL132765.2-201ENST00000610812 351 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 AL359314.1-201ENST00000616913 261 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 Z69720.2-201ENST00000624755 279 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.99□□□□□ -2.09
HDAC3O15379 TPTEP1-208ENST00000636884 213 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 MTND5P6-201ENST00000422338 1798 ntBASIC1.99□□□□□ -2.09
HDAC3O15379 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
HDAC3O15379 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HDAC3O15379 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-37P-201ENST00000362692 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-11P-201ENST00000364234 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-25P-201ENST00000383873 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-1-201ENST00000383898 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-48P-201ENST00000384161 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-36P-201ENST00000384172 107 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 291.8 ms