Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNU6-933P-201ENST00000384424 107 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RNU6-790P-201ENST00000384479 105 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RNU6-306P-201ENST00000384617 107 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 MIR521-1-201ENST00000384902 87 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 MIR517A-201ENST00000385001 87 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRRC53A6NM62 MIR548F5-201ENST00000408421 86 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
LRRC53A6NM62 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.58□□□□□ -2
LRRC53A6NM62 EEF1B2P7-201ENST00000451177 676 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 PCMTD1P1-201ENST00000455560 355 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RPL30P1-201ENST00000488676 339 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 MTND5P5-201ENST00000503764 376 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC027176.1-201ENST00000560204 514 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC093249.1-201ENST00000567049 203 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC005668.1-201ENST00000571142 476 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AL161423.1-201ENST00000613700 262 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC009233.1-201ENST00000616477 371 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC006386.2-201ENST00000624491 75 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 AC012005.1-201ENST00000624575 75 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
LRRC53A6NM62 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LRRC53A6NM62 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LRRC53A6NM62 AC009541.1-201ENST00000438279 2662 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 BTF3L4P2-201ENST00000392798 346 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL359511.1-201ENST00000402970 211 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 MIR548K-201ENST00000408406 116 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL139396.1-201ENST00000421137 167 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AC244670.1-201ENST00000436879 112 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.57□□□□□ -2
LRRC53A6NM62 HMGB1P18-201ENST00000438801 619 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL353752.1-201ENST00000454946 260 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.57□□□□□ -2
LRRC53A6NM62 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.57□□□□□ -2
LRRC53A6NM62 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.57□□□□□ -2
LRRC53A6NM62 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.57□□□□□ -2
LRRC53A6NM62 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.57□□□□□ -2
LRRC53A6NM62 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL356157.2-201ENST00000605122 111 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AC019193.3-201ENST00000609144 554 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
LRRC53A6NM62 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
LRRC53A6NM62 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.56□□□□□ -2
LRRC53A6NM62 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 RNA5SP125-201ENST00000364843 120 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 Y_RNA.339-201ENST00000365325 102 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 CBX3P9-201ENST00000402326 552 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 RN7SKP61-201ENST00000410642 295 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 COTL1P1-201ENST00000422309 375 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.56□□□□□ -2
LRRC53A6NM62 Z82205.1-201ENST00000428456 297 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AL133396.1-201ENST00000432048 687 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 MTATP6P23-201ENST00000440153 476 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AC114801.2-201ENST00000503825 781 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.56□□□□□ -2
LRRC53A6NM62 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.56□□□□□ -2
LRRC53A6NM62 AC115990.1-201ENST00000526957 301 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.56□□□□□ -2
LRRC53A6NM62 UBE2V2P2-201ENST00000587677 504 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AC005000.2-201ENST00000605468 310 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 AC124303.1-201ENST00000605703 360 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 MIR8076-201ENST00000611401 83 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 uc_338.5-201ENST00000611839 155 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 MIR6128-201ENST00000615528 109 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
LRRC53A6NM62 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LRRC53A6NM62 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC53A6NM62 snoU2_19.1-201ENST00000362361 80 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 Y_RNA.123-201ENST00000363338 102 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 Y_RNA.504-201ENST00000384481 104 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AL356432.1-201ENST00000405809 419 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 MTND4LP11-201ENST00000422184 280 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.55□□□□□ -2
LRRC53A6NM62 AL353572.1-201ENST00000442490 417 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AC091951.2-201ENST00000500762 203 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 SNORA31.16-201ENST00000516773 139 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.55□□□□□ -2
LRRC53A6NM62 AC023824.2-201ENST00000566185 400 ntBASIC2.55□□□□□ -2
LRRC53A6NM62 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms