Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RNU6-514P-201ENST00000384208 107 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 MIR487A-201ENST00000385009 80 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 MT-TR-201ENST00000387439 65 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL365496.1-201ENST00000426885 215 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AC010095.1-201ENST00000443543 144 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AP001324.2-201ENST00000461163 319 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL591473.1-201ENST00000464297 313 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 HMGB3P17-201ENST00000504195 649 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.700-201ENST00000516806 100 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 SCARNA24.2-201ENST00000516968 130 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL162274.2-201ENST00000614406 332 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AC099654.7-201ENST00000635788 2127 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 MTND5P35-201ENST00000557537 1720 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 RNU1-62P-201ENST00000362599 164 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 RNU6-1266P-201ENST00000362794 105 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 RNU6-529P-201ENST00000363383 104 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 RNU6-20P-201ENST00000384106 107 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 RNU6-1310P-201ENST00000384153 107 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 AL603910.2-201ENST00000407268 136 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 BRDTP1-201ENST00000605735 677 ntBASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TMEM88BA6NKF7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 U3.9-201ENST00000363823 204 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RNA5SP139-201ENST00000364340 117 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RNU6-200P-201ENST00000364743 107 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 MIR186-201ENST00000384988 86 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RPL26P26-201ENST00000480251 434 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RN7SL504P-201ENST00000494496 287 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 RNU2-31P-201ENST00000516954 155 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 AC233702.2-202ENST00000562547 291 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 MIR4423-201ENST00000580922 80 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 MIR4672-201ENST00000583126 81 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 AL670379.2-201ENST00000604983 252 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 U2.14-201ENST00000615943 113 ntBASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM88BA6NKF7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.16-201ENST00000362421 102 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 RNU4-35P-201ENST00000362588 141 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.498-201ENST00000384460 102 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 RNU6-1026P-201ENST00000384465 108 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AL512633.1-201ENST00000399931 655 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AL139095.1-201ENST00000404326 391 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 HSPE1P25-201ENST00000455484 251 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 RPS3P1-201ENST00000456781 192 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 RNU6-625P-201ENST00000459412 107 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC112771.1-201ENST00000463581 102 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 SNORD59.2-201ENST00000516873 68 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 MIR3945-201ENST00000581853 98 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 RPL12P50-201ENST00000603116 116 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC006023.1-201ENST00000603944 259 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC006001.4-201ENST00000622243 395 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC127459.3-201ENST00000624328 466 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AL109809.4-201ENST00000603520 2185 ntBASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM88BA6NKF7 AC139713.2-215ENST00000641428 5037 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 SNORA25.1-201ENST00000362326 128 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.65-201ENST00000362846 100 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 SNORA14A-201ENST00000364773 135 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.570-201ENST00000384750 101 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 NDUFB4P10-201ENST00000452541 359 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AL139109.1-201ENST00000455491 297 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 RPL23AP62-201ENST00000463396 453 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms