Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AP000942.4-201ENST00000604811 241 ntBASIC2.72□□□□□ -1.97
PKP4Q99569 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PKP4Q99569 AC083806.3-201ENST00000614016 455 ntBASIC2.72□□□□□ -1.97
PKP4Q99569 SCARNA17.4-201ENST00000614296 143 ntBASIC2.72□□□□□ -1.97
PKP4Q99569 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.72□□□□□ -1.97
PKP4Q99569 AL137790.1-201ENST00000634283 177 ntBASIC2.72□□□□□ -1.97
PKP4Q99569 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PKP4Q99569 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PKP4Q99569 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PKP4Q99569 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
PKP4Q99569 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
PKP4Q99569 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PKP4Q99569 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.71□□□□□ -1.98
PKP4Q99569 MTND5P30-201ENST00000452896 1731 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PKP4Q99569 Y_RNA.2-201ENST00000362330 96 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 RNU6-490P-201ENST00000362985 107 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 Y_RNA.148-201ENST00000363557 117 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 Y_RNA.151-201ENST00000363566 112 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 Y_RNA.252-201ENST00000364556 101 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 RNU6-384P-201ENST00000364900 104 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AL030996.1-201ENST00000411430 235 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AL592148.1-201ENST00000413568 445 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 AC018437.1-201ENST00000492214 406 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 RNU6-470P-201ENST00000515954 104 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AC025755.1-201ENST00000521306 278 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.71□□□□□ -1.98
PKP4Q99569 MIR3117-201ENST00000584034 78 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 RPL12P50-201ENST00000603116 116 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AL356280.1-201ENST00000603614 379 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AP000787.2-201ENST00000604432 568 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AC123912.5-201ENST00000605470 343 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 AL449363.1-201ENST00000617815 186 ntBASIC2.71□□□□□ -1.98
PKP4Q99569 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.71□□□□□ -1.98
PKP4Q99569 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PKP4Q99569 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PKP4Q99569 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PKP4Q99569 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.71□□□□□ -1.98
PKP4Q99569 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PKP4Q99569 RNU6-1059P-201ENST00000363752 98 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 SNORD14B-201ENST00000364533 90 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 Y_RNA.459-201ENST00000384251 102 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 RNU6-842P-201ENST00000384269 107 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 RNU6-331P-201ENST00000384724 107 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 Y_RNA.623-201ENST00000411128 95 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 MCFD2P1-201ENST00000417812 300 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.7□□□□□ -1.98
PKP4Q99569 AL627311.1-201ENST00000431514 115 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.7□□□□□ -1.98
PKP4Q99569 DAP3P1-201ENST00000441522 278 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 HMGN2P10-201ENST00000448085 265 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AL583843.1-201ENST00000456070 346 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 PTP4A1P4-201ENST00000512479 322 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 SCARNA16.2-201ENST00000516520 172 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 RNA5SP384-201ENST00000516615 116 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AC023442.1-201ENST00000531247 422 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AL645944.1-201ENST00000603857 493 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AC007938.3-201ENST00000604965 623 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 AC008121.3-201ENST00000618726 433 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 SCARNA4.1-201ENST00000628597 123 ntBASIC2.7□□□□□ -1.98
PKP4Q99569 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.7□□□□□ -1.98
PKP4Q99569 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
PKP4Q99569 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKP4Q99569 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PKP4Q99569 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 RNU6-7-201ENST00000364784 107 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 RNU6-596P-201ENST00000365395 98 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 RNU6-8-201ENST00000365467 107 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 RNU6-1032P-201ENST00000384100 107 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 SNORA41-201ENST00000384675 132 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 RNU6-1106P-201ENST00000390845 107 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 TOMM20P4-201ENST00000427861 435 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 AL133396.1-201ENST00000432048 687 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 AC087499.2-201ENST00000432861 149 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP4Q99569 MTND3P2-201ENST00000438452 342 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP4Q99569 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.69□□□□□ -1.98
PKP4Q99569 FTH1P25-201ENST00000447665 469 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP4Q99569 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.69□□□□□ -1.98
PKP4Q99569 MTND5P22-201ENST00000458380 195 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
PKP4Q99569 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.69□□□□□ -1.98
PKP4Q99569 AC022493.2-201ENST00000506122 481 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms