Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.136-201ENST00000363444 102 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-105P-201ENST00000363909 104 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-879P-201ENST00000364328 108 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-968P-201ENST00000384076 107 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-514P-201ENST00000384208 107 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-843P-201ENST00000384454 104 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-21P-201ENST00000384710 107 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 MIR483-201ENST00000385070 76 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 SNORD12B-201ENST00000410433 91 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 AC007560.1-201ENST00000426912 237 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 SETP5-201ENST00000437270 562 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 CYCSP32-201ENST00000440548 321 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 ANP32BP2-201ENST00000454525 545 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 snoU13.4-201ENST00000458916 104 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RN7SL601P-201ENST00000471221 293 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 AC025518.1-201ENST00000479856 347 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RNU6-572P-201ENST00000516724 80 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 MIR3921-201ENST00000577308 85 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 MIR5195-201ENST00000583555 115 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 AC099506.2-201ENST00000623074 221 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 SCARNA4-202ENST00000625402 129 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.73□□□□□ -1.81
EPHB3P54753 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.73□□□□□ -1.81
EPHB3P54753 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 AC009541.1-201ENST00000438279 2662 ntBASIC3.73□□□□□ -1.81
EPHB3P54753 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHB3P54753 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.72□□□□□ -1.81
EPHB3P54753 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EPHB3P54753 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
EPHB3P54753 MIR410-201ENST00000362222 80 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU4-35P-201ENST00000362588 141 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU6-1286P-201ENST00000383871 107 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 Y_RNA.418-201ENST00000384029 102 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU6-72P-201ENST00000384285 79 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 Y_RNA.570-201ENST00000384750 101 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 MIR153-2-201ENST00000385225 87 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 SNORA46.1-201ENST00000391069 153 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.72□□□□□ -1.81
EPHB3P54753 AL356535.1-201ENST00000440335 398 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AC096638.1-201ENST00000444678 216 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.72□□□□□ -1.81
EPHB3P54753 AP000870.1-201ENST00000472927 406 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AC139453.3-201ENST00000493276 369 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU6-1219P-201ENST00000516143 112 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU6-479P-201ENST00000516348 105 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU6-1256P-201ENST00000516539 103 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 SNORA27.4-201ENST00000516650 95 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RN7SKP49-201ENST00000516675 260 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RNU7-110P-201ENST00000516891 62 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 RN7SKP272-201ENST00000516988 232 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
EPHB3P54753 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.72□□□□□ -1.81
EPHB3P54753 AC073349.3-201ENST00000617616 186 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AC091953.5-201ENST00000622919 233 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.72□□□□□ -1.81
EPHB3P54753 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
EPHB3P54753 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
EPHB3P54753 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
EPHB3P54753 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.81
EPHB3P54753 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
EPHB3P54753 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHB3P54753 RNA5SP361-201ENST00000362686 118 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 RNU6-525P-201ENST00000363685 104 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 Y_RNA.446-201ENST00000384178 104 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 RNU6-22P-201ENST00000384355 107 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 RNU6-1289P-201ENST00000384431 106 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
EPHB3P54753 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AL390729.2-201ENST00000416137 156 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 EIF1AXP1-201ENST00000419267 435 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AC098614.2-201ENST00000426040 255 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AC124916.1-201ENST00000444020 547 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AL353705.4-201ENST00000449661 238 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AP001025.1-201ENST00000486139 332 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.71□□□□□ -1.82
EPHB3P54753 AC074133.1-201ENST00000515696 183 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHB3P54753 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHB3P54753 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHB3P54753 MIR4308-201ENST00000580634 81 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 AC048347.1-201ENST00000624621 427 ntBASIC3.71□□□□□ -1.82
EPHB3P54753 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
EPHB3P54753 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHB3P54753 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHB3P54753 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EPHB3P54753 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHB3P54753 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
EPHB3P54753 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHB3P54753 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHB3P54753 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHB3P54753 RNA5SP197-201ENST00000363357 119 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms