Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 U3.44-201ENST00000458938 192 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHS1O60500 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHS1O60500 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHS1O60500 SNORA31.16-201ENST00000516773 139 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 RNU7-110P-201ENST00000516891 62 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 RNU6-1198P-201ENST00000516904 67 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHS1O60500 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHS1O60500 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 MIR6076-201ENST00000617521 113 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 FTX_2.1-201ENST00000618816 94 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
NPHS1O60500 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NPHS1O60500 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHS1O60500 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHS1O60500 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPHS1O60500 AC135776.4-201ENST00000624300 1904 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 Y_RNA.76-201ENST00000362931 109 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 RNU6-873P-201ENST00000363833 107 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHS1O60500 RNU6-20P-201ENST00000384106 107 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 RNU6-21P-201ENST00000384710 107 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 SNORA26.3-201ENST00000391119 136 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHS1O60500 AC010095.1-201ENST00000443543 144 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 RPL30P14-201ENST00000482744 348 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 RN7SKP40-201ENST00000517211 242 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.56□□□□□ -1.84
NPHS1O60500 AK6P2-201ENST00000549020 471 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHS1O60500 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHS1O60500 AL357075.2-201ENST00000614906 189 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.56□□□□□ -1.84
NPHS1O60500 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPHS1O60500 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHS1O60500 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NPHS1O60500 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NPHS1O60500 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHS1O60500 Y_RNA.44-201ENST00000362676 108 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 RNU6-326P-201ENST00000365480 107 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 Y_RNA.570-201ENST00000384750 101 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 MIR549A-201ENST00000385268 96 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 PTMAP5-201ENST00000393073 333 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHS1O60500 AC138623.1-201ENST00000418060 216 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC019205.3-201ENST00000424573 156 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHS1O60500 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHS1O60500 AC117440.1-201ENST00000474107 571 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC090525.1-201ENST00000479116 478 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 SNORA40.9-201ENST00000515895 93 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 RNU2-31P-201ENST00000516954 155 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 CYCSP30-201ENST00000546447 172 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHS1O60500 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHS1O60500 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHS1O60500 AC244505.7-201ENST00000599675 272 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC002076.2-201ENST00000617362 122 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 MIR6758-201ENST00000620653 63 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 AC004944.1-201ENST00000517807 3059 ntBASIC3.55□□□□□ -1.84
NPHS1O60500 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHS1O60500 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHS1O60500 AC002546.1-201ENST00000588041 2504 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHS1O60500 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHS1O60500 Y_RNA.83-201ENST00000363005 113 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AC068538.1-201ENST00000376856 336 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 Y_RNA.569-201ENST00000384749 103 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NPHS1O60500 AL133475.1-201ENST00000404414 305 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNA5SP317-201ENST00000410176 116 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNA5SP311-201ENST00000411290 116 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AC017083.1-201ENST00000428093 483 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RPS15AP5-201ENST00000436276 388 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 SETP5-201ENST00000437270 562 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHS1O60500 AL714022.1-201ENST00000439897 151 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHS1O60500 AL138752.1-201ENST00000452964 351 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AC010099.1-201ENST00000455434 375 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNU7-170P-201ENST00000459303 61 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHS1O60500 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AP000867.2-201ENST00000532468 320 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AL606490.9-201ENST00000603331 271 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 MIR378J-201ENST00000611988 109 ntBASIC3.54□□□□□ -1.84
NPHS1O60500 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHS1O60500 AC083809.1-201ENST00000615051 472 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms