Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 RPS29P27-201ENST00000463711 170 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC090515.1-201ENST00000465295 476 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 MTCO1P29-201ENST00000496868 288 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AIG1P1-201ENST00000503376 148 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC091874.1-201ENST00000511402 339 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 RNU2-53P-201ENST00000516257 147 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC005730.3-201ENST00000583067 366 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC092608.2-201ENST00000624427 218 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 RNU6-1285P-201ENST00000363480 105 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 SNORA72.1-201ENST00000363485 129 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 RNY3P14-201ENST00000384309 102 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 RN7SKP32-201ENST00000410167 303 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 AP000275.1-201ENST00000411943 390 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 AIMP1P2-201ENST00000425294 312 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 MTND3P10-201ENST00000450967 341 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 CPDP1-201ENST00000579660 283 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 MIR3200-201ENST00000580767 85 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 MIR548S-201ENST00000581352 82 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 AC091135.1-201ENST00000585943 307 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LRRC53A6NM62 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
LRRC53A6NM62 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
LRRC53A6NM62 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC53A6NM62 AC135776.4-201ENST00000624300 1904 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 Y_RNA.184-201ENST00000363884 108 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC53A6NM62 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 MTND1P17-201ENST00000448961 204 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 snoU13.14-201ENST00000459372 104 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 U8.21-201ENST00000459536 136 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AL121594.1-201ENST00000475906 575 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AP005902.1-201ENST00000521358 186 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 AL121579.1-201ENST00000555129 305 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 MIR4790-201ENST00000577799 79 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 MIR4446-201ENST00000578505 67 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC53A6NM62 RPL30P11-203ENST00000598995 310 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 MIR3976-201ENST00000606807 139 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AL022345.1-201ENST00000607292 135 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 AL133215.3-201ENST00000609801 448 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC53A6NM62 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
LRRC53A6NM62 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 RNU6-655P-201ENST00000362858 107 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 RNU6-227P-201ENST00000362865 103 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 RNU6-1141P-201ENST00000364520 107 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 SNORD81.2-201ENST00000365153 76 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 RPL23AP95-201ENST00000426806 265 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC063976.3-201ENST00000426849 329 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC103851.1-201ENST00000506833 274 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 PTP4A1P4-201ENST00000512479 322 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 HSPE1P4-201ENST00000550617 308 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 AL355073.2-201ENST00000612106 557 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 AC135507.2-201ENST00000612443 309 ntBASIC2.59□□□□□ -1.99
LRRC53A6NM62 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
LRRC53A6NM62 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.59□□□□□ -2
LRRC53A6NM62 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.58□□□□□ -2
LRRC53A6NM62 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 Y_RNA.166-201ENST00000363730 102 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
LRRC53A6NM62 RNU6-1032P-201ENST00000384100 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms