Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 AC073901.1-201ENST00000462471 408 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 S100A11P2-201ENST00000467589 312 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 RNU6-496P-201ENST00000516145 99 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 RNU7-110P-201ENST00000516891 62 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 RNU6-711P-201ENST00000517255 106 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 AL078605.1-201ENST00000603529 500 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 MIR7851-201ENST00000610611 160 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 AC005086.4-201ENST00000623065 213 ntBASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TMEM88BA6NKF7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 Y_RNA.54-201ENST00000362766 105 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 SNORA80A-201ENST00000363922 136 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 RNU6-1140P-201ENST00000410517 106 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AL160275.2-201ENST00000412010 394 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AC007395.1-201ENST00000451333 677 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AP000705.1-201ENST00000454567 350 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 MTND1P19-201ENST00000511780 315 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AC074133.1-201ENST00000515696 183 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 SNORA40.9-201ENST00000515895 93 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 AC026470.2-201ENST00000561492 181 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 MIR3936-201ENST00000584304 110 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 MFSD8-236ENST00000641509 4050 ntBASIC4.41□□□□□ -1.7
TMEM88BA6NKF7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TMEM88BA6NKF7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 PHBP14-201ENST00000512887 367 ntBASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 RNU4-71P-201ENST00000516258 113 ntBASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.4□□□□□ -1.71
TMEM88BA6NKF7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 AC026241.1-201ENST00000517873 2142 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU6-655P-201ENST00000362858 107 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNA5SP374-201ENST00000362939 125 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU6-626P-201ENST00000363354 107 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU6-1210P-201ENST00000363775 107 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SNORA72.2-201ENST00000365028 127 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU6-793P-201ENST00000384233 104 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU1-57P-201ENST00000384491 166 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 Y_RNA.541-201ENST00000384640 113 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 CBX3P9-201ENST00000402326 552 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 MIR1271-201ENST00000408537 86 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SNORA3C-201ENST00000408792 125 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RPL23AP36-201ENST00000413895 458 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SETP5-201ENST00000437270 562 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 UQCRBP2-201ENST00000447827 297 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RPL36AP48-201ENST00000485521 314 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 SERF1AP1-201ENST00000514575 187 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 RNU6-111P-201ENST00000517179 105 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 AC005176.2-201ENST00000596933 147 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TMEM88BA6NKF7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 RNU6-326P-201ENST00000365480 107 ntBASIC4.38□□□□□ -1.71
TMEM88BA6NKF7 SNORA18.3-201ENST00000384122 132 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms