Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 COPS8P3-201ENST00000526024 482 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AP005639.2-201ENST00000527592 928 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AP003072.1-201ENST00000531740 145 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC093249.1-201ENST00000567049 203 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 APOOP1-201ENST00000604695 592 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AL670379.4-201ENST00000605279 254 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC116312.1-201ENST00000606841 314 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AL359547.2-201ENST00000615810 418 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 CDC27P3-201ENST00000635418 1910 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
DDX43Q9NXZ2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.33-201ENST00000362591 102 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.259-201ENST00000364619 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RNU1-100P-201ENST00000365255 165 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Z98749.2-208ENST00000381646 500 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.384-201ENST00000383909 102 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RNU6-43P-201ENST00000384302 107 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RNU6-393P-201ENST00000384475 107 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MIR27B-201ENST00000385129 97 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MIR147B-201ENST00000390185 80 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AL445529.1-201ENST00000398713 389 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC007560.1-201ENST00000426912 237 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RPL32P28-201ENST00000443577 397 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AL078601.1-201ENST00000444542 271 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 FTH1P25-201ENST00000447665 469 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.639-201ENST00000458981 102 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 HMGN1P10-201ENST00000474557 553 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC005741.1-201ENST00000511094 432 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RN7SKP24-201ENST00000515888 284 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RNA5SP454-201ENST00000517231 127 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MIR5692C1-201ENST00000585309 91 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AL158032.1-201ENST00000605401 106 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AC124303.1-201ENST00000605703 360 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.812-201ENST00000610788 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 uc_338.14-201ENST00000613162 166 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.784-201ENST00000613803 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 AL138726.1-201ENST00000614873 333 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.787-201ENST00000616522 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.780-201ENST00000617336 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.801-201ENST00000619005 101 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MIR7157-201ENST00000635801 60 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MTND4P27-201ENST00000450813 1354 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 MTND5P30-201ENST00000452896 1731 ntBASIC2.71□□□□□ -1.98
DDX43Q9NXZ2 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 RNU6-395P-201ENST00000365662 106 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 SNORD116-11-201ENST00000383882 92 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 RNU6-1013P-201ENST00000384180 107 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.579-201ENST00000390939 94 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 SNORA40C-201ENST00000391285 128 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AL360271.2-201ENST00000447710 161 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 SNORA14.1-201ENST00000516113 141 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 RNU6-559P-201ENST00000516151 98 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 RNU6-581P-201ENST00000516214 105 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 APOOP3-201ENST00000536787 586 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AP000763.2-201ENST00000540641 163 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AL442663.2-201ENST00000554385 511 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 LINC00933-203ENST00000559812 219 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC027176.1-201ENST00000560204 514 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC060766.3-201ENST00000591442 263 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC008121.1-201ENST00000603244 268 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC126177.8-201ENST00000618339 1015 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC098657.3-201ENST00000620434 263 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 MTND4LP32-201ENST00000636111 270 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 ZNF271P-202ENST00000465539 1970 ntBASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX43Q9NXZ2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
DDX43Q9NXZ2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
DDX43Q9NXZ2 Y_RNA.315-201ENST00000365117 102 ntBASIC2.69□□□□□ -1.98
DDX43Q9NXZ2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms