Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC048347.1-201ENST00000624621 427 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PNKPQ96T60 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PNKPQ96T60 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
PNKPQ96T60 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PNKPQ96T60 AC008669.1-201ENST00000565823 2178 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PNKPQ96T60 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PNKPQ96T60 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PNKPQ96T60 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU6-942P-201ENST00000363002 107 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU6-105P-201ENST00000363909 104 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU6-595P-201ENST00000363944 107 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 Y_RNA.424-201ENST00000384063 103 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU6-1035P-201ENST00000384477 107 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 MIR888-201ENST00000401186 77 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PNKPQ96T60 BMS1P22-201ENST00000414726 313 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AC092423.1-201ENST00000430165 186 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.31□□□□□ -1.88
PNKPQ96T60 RPL37P4-201ENST00000448908 268 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
PNKPQ96T60 AC114801.2-201ENST00000503825 781 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 RNU6-635P-201ENST00000516651 102 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 SNORA31.18-201ENST00000517043 134 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.31□□□□□ -1.88
PNKPQ96T60 AMZ2P1-203ENST00000565833 850 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 MIR5701-3-201ENST00000578890 82 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 MIR5188-201ENST00000583467 113 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 MIR5701-1-201ENST00000585138 82 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.31□□□□□ -1.88
PNKPQ96T60 MIR5701-2-201ENST00000615634 82 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 AC138305.3-201ENST00000624988 240 ntBASIC3.31□□□□□ -1.88
PNKPQ96T60 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.3□□□□□ -1.88
PNKPQ96T60 AC022336.2-201ENST00000568966 2538 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 RNU6-227P-201ENST00000362865 103 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 RNU6-238P-201ENST00000363313 106 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 Y_RNA.123-201ENST00000363338 102 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 RNU6-527P-201ENST00000363425 104 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 Y_RNA.149-201ENST00000363558 117 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PNKPQ96T60 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PNKPQ96T60 AL591034.1-201ENST00000407447 340 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AC099548.1-201ENST00000421443 426 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AC079354.2-201ENST00000453523 154 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 RPS27AP10-201ENST00000496103 208 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 Y_RNA.721-201ENST00000517207 102 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AP004607.1-201ENST00000524456 203 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.3□□□□□ -1.88
PNKPQ96T60 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.3□□□□□ -1.88
PNKPQ96T60 LARP7P3-201ENST00000579888 337 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 MIR3149-201ENST00000584629 83 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AC024153.1-201ENST00000603103 365 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AC124312.5-201ENST00000604451 268 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AL121655.1-201ENST00000605811 308 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 AC010205.1-201ENST00000616668 449 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PNKPQ96T60 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PNKPQ96T60 MIR6733-201ENST00000635723 61 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PNKPQ96T60 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.3□□□□□ -1.88
PNKPQ96T60 MTND5P7-201ENST00000413558 1798 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
PNKPQ96T60 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PNKPQ96T60 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PNKPQ96T60 Y_RNA.106-201ENST00000363189 100 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 SET-203ENST00000372688 801 ntTSL 2 BASIC3.29□□□□□ -1.88
PNKPQ96T60 RNU6-505P-201ENST00000384427 107 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PNKPQ96T60 RNA5SP494-201ENST00000410653 129 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 COTL1P1-201ENST00000422309 375 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PNKPQ96T60 RPL23AP49-201ENST00000492925 468 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.29□□□□□ -1.88
PNKPQ96T60 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 AC010186.2-204ENST00000537668 439 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 MIR2682-201ENST00000580305 110 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.29□□□□□ -1.88
PNKPQ96T60 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
PNKPQ96T60 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PNKPQ96T60 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PNKPQ96T60 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PNKPQ96T60 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.88
PNKPQ96T60 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PNKPQ96T60 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PNKPQ96T60 Y_RNA.176-201ENST00000363815 109 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 Y_RNA.193-201ENST00000363979 102 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 RNU1-140P-201ENST00000365040 165 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 SNORD14.1-201ENST00000365609 90 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 Y_RNA.452-201ENST00000384202 108 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PNKPQ96T60 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms