Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC091489.2-201ENST00000566263 604 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC091135.1-201ENST00000585943 307 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL353778.1-201ENST00000603149 408 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC121334.2-201ENST00000605387 271 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AC080078.3-201ENST00000605407 463 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL022345.1-201ENST00000607292 135 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL031667.3-201ENST00000620124 655 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL121890.5-201ENST00000620848 304 ntBASIC0.93□□□□□ -2.26
LRRC28Q86X40 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.93□□□□□ -2.26
LRRC28Q86X40 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LRRC28Q86X40 AC073343.1-201ENST00000328239 651 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 MIR302D-201ENST00000362275 68 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 Y_RNA.22-201ENST00000362492 102 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 SNORD56.2-201ENST00000363242 71 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 Y_RNA.238-201ENST00000364441 102 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 SNORD32B-201ENST00000364460 84 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 RNU6-1200P-201ENST00000384162 107 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 RNU6-809P-201ENST00000384461 107 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 RNU2-3P-201ENST00000410144 191 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 Y_RNA.597-201ENST00000410463 100 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 AC006366.1-201ENST00000422002 759 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 MTND1P30-201ENST00000441241 901 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 MTCO2P29-201ENST00000465212 189 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 COX6CP14-201ENST00000469580 174 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 UBE2V1P12-201ENST00000503954 474 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 AC104806.1-201ENST00000508720 308 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 RNU6-123P-201ENST00000516163 102 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 SNORA31.17-201ENST00000516953 127 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 RNU6-902P-201ENST00000517212 91 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 MTND2P7-201ENST00000521337 640 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
LRRC28Q86X40 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LRRC28Q86X40 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNU6-212P-201ENST00000362642 104 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNU6-78P-201ENST00000362897 107 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNU6-1285P-201ENST00000363480 105 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 Y_RNA.332-201ENST00000365271 113 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 SNORA24.1-201ENST00000384401 135 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 MIR1276-201ENST00000408707 83 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 MTCO1P44-201ENST00000441935 243 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 KATNBL1P3-201ENST00000443475 909 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 TAF9P1-201ENST00000445421 515 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RPL39P29-201ENST00000447779 157 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC245517.4-201ENST00000448601 281 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 TAF9P2-201ENST00000454958 515 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 DUXAP8-207ENST00000456786 622 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNU6-333P-201ENST00000459117 107 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RPL30P12-201ENST00000474666 353 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNU5A-4P-201ENST00000516588 111 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 RNA5SP102-201ENST00000516865 106 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 AP003181.2-201ENST00000528941 181 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 MTND4P33-201ENST00000556706 766 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC005668.1-201ENST00000571142 476 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 SNORA77B-201ENST00000578179 125 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 MIR4999-201ENST00000585029 91 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC008521.1-201ENST00000587471 187 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC018889.1-201ENST00000605372 397 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AL451064.1-201ENST00000607718 471 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC28Q86X40 AL590240.4-201ENST00000616908 390 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AL607023.1-201ENST00000620045 248 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AC007792.1-201ENST00000623023 402 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 AL445984.1-201ENST00000637834 659 ntBASIC0.91□□□□□ -2.26
LRRC28Q86X40 SNORD56.1-201ENST00000362913 68 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 RNU6-112P-201ENST00000363599 104 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 RNU6-61P-201ENST00000365528 109 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 RNU6-296P-201ENST00000384608 107 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 RNU6-1179P-201ENST00000384667 107 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 MIR558-201ENST00000384920 94 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 MTCYBP36-201ENST00000404146 440 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 MTCO2P23-201ENST00000425216 680 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC28Q86X40 AP000797.1-201ENST00000478870 387 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.9□□□□□ -2.27
LRRC28Q86X40 RNU5F-2P-201ENST00000516066 82 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC090115.3-201ENST00000553218 849 ntBASIC0.9□□□□□ -2.27
LRRC28Q86X40 AC002400.1-201ENST00000569310 726 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms