Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-72P-201ENST00000384285 79 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RNU6-472P-201ENST00000384299 107 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RNU6-140P-201ENST00000384566 108 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 SNORA46-201ENST00000384762 135 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 SNORD67-201ENST00000390833 111 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RNU6-1197P-201ENST00000391183 107 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 Y_RNA.618-201ENST00000410949 107 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT40Q6A162 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT40Q6A162 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT40Q6A162 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.57□□□□□ -1.84
KRT40Q6A162 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT40Q6A162 U8.21-201ENST00000459536 136 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AK3P2-201ENST00000507976 429 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AC010265.1-201ENST00000513509 211 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RNU6-794P-201ENST00000517261 64 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AC109479.2-201ENST00000517842 174 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT40Q6A162 MIR3690-201ENST00000580266 75 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 RAC1P9-201ENST00000604990 392 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AC093732.2-201ENST00000607950 274 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 AC092628.2-201ENST00000622492 339 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.57□□□□□ -1.84
KRT40Q6A162 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRT40Q6A162 MTND5P27-201ENST00000428871 1720 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 RNU6-78P-201ENST00000362897 107 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 Y_RNA.188-201ENST00000363952 111 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 RNU6-217P-201ENST00000384164 104 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 MIR518D-201ENST00000385014 87 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 MIR34A-201ENST00000385130 110 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 MT-TR-201ENST00000387439 65 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 RPS29P13-201ENST00000402041 169 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 HSPE1P26-201ENST00000405341 275 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT40Q6A162 DYNLT3P2-201ENST00000442517 295 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 AC073910.1-201ENST00000445047 438 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 HMGB3P8-201ENST00000449709 577 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT40Q6A162 RNU7-4P-201ENST00000516961 62 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 RNU6-1271P-201ENST00000517049 105 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.56□□□□□ -1.84
KRT40Q6A162 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT40Q6A162 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
KRT40Q6A162 MIR3668-201ENST00000582138 75 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.56□□□□□ -1.84
KRT40Q6A162 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 U2.1-201ENST00000618978 145 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 AC048347.1-201ENST00000624621 427 ntBASIC3.56□□□□□ -1.84
KRT40Q6A162 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRT40Q6A162 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.56□□□□□ -1.84
KRT40Q6A162 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KRT40Q6A162 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRT40Q6A162 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRT40Q6A162 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.55□□□□□ -1.84
KRT40Q6A162 SNORA31-201ENST00000362607 130 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 Y_RNA.214-201ENST00000364201 112 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 Y_RNA.222-201ENST00000364264 102 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 SNORD15B-201ENST00000384714 146 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 RNA5SP494-201ENST00000410653 129 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 ELOCP20-201ENST00000422460 345 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AC092423.1-201ENST00000430165 186 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 SETP5-201ENST00000437270 562 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.55□□□□□ -1.84
KRT40Q6A162 PCNPP5-201ENST00000452246 481 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 RPL30P5-201ENST00000494923 336 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AC093852.1-201ENST00000503587 266 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 RNU6-1183P-201ENST00000517054 60 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 VN1R91P-201ENST00000594377 169 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AC099778.2-201ENST00000610904 211 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AL138825.1-201ENST00000618587 192 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 MIR8062-201ENST00000621515 85 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AC007792.1-201ENST00000623023 402 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.55□□□□□ -1.84
KRT40Q6A162 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
KRT40Q6A162 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.55□□□□□ -1.84
KRT40Q6A162 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
KRT40Q6A162 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.54□□□□□ -1.84
KRT40Q6A162 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT40Q6A162 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 AC073325.2-201ENST00000339545 159 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 RNU6-778P-201ENST00000363269 103 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 Y_RNA.307-201ENST00000365022 117 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 RNU6-806P-201ENST00000365147 105 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms