Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 DEFB131E-202ENST00000602581 683 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC008147.4-201ENST00000617570 1204 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 MTND5P17-201ENST00000418405 1603 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN4AP35499 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SCN4AP35499 Y_RNA.77-201ENST00000362962 107 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 RNY3P10-201ENST00000384764 102 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AL513475.1-201ENST00000406602 315 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 RNU2-32P-201ENST00000411193 191 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.5□□□□□ -2.17
SCN4AP35499 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN4AP35499 AC010153.1-201ENST00000432862 727 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.5□□□□□ -2.17
SCN4AP35499 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN4AP35499 MTND3P25-201ENST00000509243 135 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 MTCO3P7-201ENST00000510008 774 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN4AP35499 MTND1P22-201ENST00000510572 951 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC104136.1-201ENST00000512969 394 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN4AP35499 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN4AP35499 AC006199.1-201ENST00000548728 219 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 OR1M4P-201ENST00000589199 287 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN4AP35499 AC069294.1-201ENST00000608397 350 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AC024940.5-201ENST00000622889 474 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 AP002791.1-201ENST00000623291 381 ntBASIC1.5□□□□□ -2.17
SCN4AP35499 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCN4AP35499 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
SCN4AP35499 RNU6-1210P-201ENST00000363775 107 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 RNU4-66P-201ENST00000365199 138 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 SNORA75B-201ENST00000384053 137 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 RNU6-533P-201ENST00000384144 107 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 SNORD116-1-201ENST00000384335 95 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 RNU6-39P-201ENST00000384344 107 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 MIR301A-201ENST00000385261 86 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 RNA5SP390-201ENST00000410191 113 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 RNU2-36P-201ENST00000410361 191 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN4AP35499 AC097463.2-201ENST00000421074 142 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN4AP35499 AL353706.1-201ENST00000436728 494 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN4AP35499 MTND1P18-201ENST00000448191 573 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN4AP35499 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN4AP35499 RPL30P12-201ENST00000474666 353 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.49□□□□□ -2.17
SCN4AP35499 AC005178.1-201ENST00000508392 440 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC074344.1-201ENST00000512823 224 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 SNORA18.6-201ENST00000516792 115 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC022616.3-201ENST00000523940 148 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN4AP35499 BNIP3P6-201ENST00000549284 499 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN4AP35499 AC136619.2-201ENST00000563361 631 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC073648.5-201ENST00000603502 305 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AL355297.2-201ENST00000604792 129 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AP000860.1-201ENST00000605250 559 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 AC008250.2-201ENST00000615261 205 ntBASIC1.49□□□□□ -2.17
SCN4AP35499 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN4AP35499 AC138393.1-203ENST00000327086 343 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-1287P-201ENST00000362914 107 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU4-91P-201ENST00000364778 135 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SCN4AP35499 SNORD116-9-201ENST00000384000 95 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 SNORD116-3-201ENST00000384287 95 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 SNORD116-7-201ENST00000384404 95 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 SNORD116-5-201ENST00000384462 95 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-1060P-201ENST00000384664 107 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-817P-201ENST00000391083 104 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU1-139P-201ENST00000391307 165 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU2-66P-201ENST00000410650 161 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 EEF1A1P40-201ENST00000412883 573 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN4AP35499 AL353621.1-201ENST00000418219 243 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 AC090960.1-201ENST00000421072 306 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 AL365203.2-201ENST00000423444 196 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN4AP35499 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN4AP35499 AL357134.1-201ENST00000445848 426 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 snoU109.2-201ENST00000459316 135 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN4AP35499 RNU5F-2P-201ENST00000516066 82 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-405P-201ENST00000516637 110 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-113P-201ENST00000516653 101 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNU6-914P-201ENST00000516749 109 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 RNA5SP337-201ENST00000517007 109 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 AC118273.2-201ENST00000532092 465 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 MIR5000-201ENST00000577717 103 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 MIR4658-201ENST00000584344 65 ntBASIC1.48□□□□□ -2.17
SCN4AP35499 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN4AP35499 AL096840.1-201ENST00000603287 93 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms