Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU1-62P-201ENST00000362599 164 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 Y_RNA.127-201ENST00000363386 109 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 RNU6-622P-201ENST00000384272 103 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 MIR549A-201ENST00000385268 96 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC096649.2-201ENST00000416186 393 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC019205.3-201ENST00000424573 156 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 RPL26P9-201ENST00000457466 433 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 RNA5SP246-201ENST00000458909 119 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC114982.1-201ENST00000469402 321 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 UQCRHP4-201ENST00000471686 272 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC091167.1-201ENST00000492017 396 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC078918.1-201ENST00000498515 228 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.21□□□□□ -1.74
NFKB1P19838 RN7SKP164-201ENST00000516138 266 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 RNU2-12P-201ENST00000517216 168 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
NFKB1P19838 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 MIR4431-201ENST00000579990 94 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 MIR3138-201ENST00000585238 82 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 AC006380.1-201ENST00000603598 186 ntBASIC4.21□□□□□ -1.74
NFKB1P19838 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NFKB1P19838 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.74
NFKB1P19838 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NFKB1P19838 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.21□□□□□ -1.74
NFKB1P19838 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.21□□□□□ -1.74
NFKB1P19838 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
NFKB1P19838 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NFKB1P19838 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NFKB1P19838 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NFKB1P19838 RNA5SP475-201ENST00000410568 110 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 MTND4LP9-201ENST00000427694 174 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 AC006011.1-201ENST00000442758 349 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 HMGN2P10-201ENST00000448085 265 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 AC012308.1-201ENST00000451232 178 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 AL137159.1-201ENST00000452808 512 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 U8.19-201ENST00000459095 133 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 RNU6-581P-201ENST00000516214 105 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 IPO5P1-202ENST00000600039 287 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 ARF4P1-201ENST00000605447 541 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 AC004825.2-201ENST00000616634 455 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
NFKB1P19838 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.2□□□□□ -1.74
NFKB1P19838 ZNF962P-201ENST00000443465 3140 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NFKB1P19838 AL136964.1-201ENST00000622038 2990 ntBASIC4.2□□□□□ -1.74
NFKB1P19838 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
NFKB1P19838 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
NFKB1P19838 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 RNU6-727P-201ENST00000363592 107 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 RNU6-103P-201ENST00000363686 107 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 Y_RNA.218-201ENST00000364218 104 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 RPL30P13-201ENST00000418873 348 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.19□□□□□ -1.74
NFKB1P19838 AL035461.1-201ENST00000421490 332 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
NFKB1P19838 AL353748.1-201ENST00000440753 474 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 AC090525.1-201ENST00000479116 478 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 RNU6-436P-201ENST00000516171 114 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AC115990.1-201ENST00000526957 301 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 DEFB131C-201ENST00000528817 165 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.19□□□□□ -1.74
NFKB1P19838 NACAP3-201ENST00000552100 481 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.19□□□□□ -1.74
NFKB1P19838 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.19□□□□□ -1.74
NFKB1P19838 MIR4284-201ENST00000578924 81 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 AL133383.2-201ENST00000622958 2336 ntBASIC4.19□□□□□ -1.74
NFKB1P19838 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.19□□□□□ -1.74
NFKB1P19838 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NFKB1P19838 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NFKB1P19838 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
NFKB1P19838 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 AC106871.1-201ENST00000568324 3102 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.18□□□□□ -1.74
NFKB1P19838 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNU4-11P-201ENST00000365287 132 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 SNORD116-14-201ENST00000383894 92 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 SNORD116-17-201ENST00000383929 92 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 SNORD116-15-201ENST00000384445 92 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 SNORD116-19-201ENST00000384729 92 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNU6-578P-201ENST00000390980 103 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 U3.40-201ENST00000408706 208 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.18□□□□□ -1.74
NFKB1P19838 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.18□□□□□ -1.74
NFKB1P19838 RN7SL481P-201ENST00000477764 299 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 AC105137.1-201ENST00000484355 562 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNU6-1333P-201ENST00000516162 93 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms