Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 MIR449A-201ENST00000362113 91 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.14-201ENST00000362415 103 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU1-100P-201ENST00000365255 165 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU6-214P-201ENST00000384130 107 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU2-33P-201ENST00000410344 192 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU2-14P-201ENST00000411053 191 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU6-130P-201ENST00000411112 103 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC099799.1-201ENST00000439809 192 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC073910.1-201ENST00000445047 438 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC234775.1-201ENST00000454247 670 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RNU7-138P-201ENST00000459479 64 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC098869.1-201ENST00000481627 292 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC018437.1-201ENST00000492214 406 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.673-201ENST00000516306 88 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 Z98751.3-201ENST00000604447 521 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AC096772.1-201ENST00000609146 564 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 MIR6130-201ENST00000619419 109 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 AL031601.2-202ENST00000622650 282 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNHG28P0DPA3 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
SNHG28P0DPA3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNHG28P0DPA3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNHG28P0DPA3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
SNHG28P0DPA3 PABPC1P7-201ENST00000413177 1513 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR518C-201ENST00000384822 101 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RNU6-712P-201ENST00000410558 100 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 AL030996.1-201ENST00000411430 235 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3□□□□□ -1.93
SNHG28P0DPA3 UBE2V1P4-201ENST00000425374 344 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3□□□□□ -1.93
SNHG28P0DPA3 MTND4LP30-201ENST00000454092 297 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RNU7-169P-201ENST00000459456 61 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RN7SL297P-201ENST00000483161 293 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3□□□□□ -1.93
SNHG28P0DPA3 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RPL17P19-201ENST00000489069 552 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3□□□□□ -1.93
SNHG28P0DPA3 RNU6-397P-201ENST00000516226 104 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RNU6-914P-201ENST00000516749 109 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 RN7SKP258-201ENST00000517151 304 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 SNRPGP16-201ENST00000533275 226 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3□□□□□ -1.93
SNHG28P0DPA3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3□□□□□ -1.93
SNHG28P0DPA3 AC174048.1-201ENST00000603389 144 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR3976-201ENST00000606807 139 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR1244-1-201ENST00000612829 85 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 AL355810.1-201ENST00000614629 552 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR1244-3-201ENST00000635744 85 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 U2.22-201ENST00000636441 106 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR1244-2-201ENST00000636449 85 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 MIR1244-4-202ENST00000636813 85 ntBASIC3□□□□□ -1.93
SNHG28P0DPA3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SNHG28P0DPA3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3□□□□□ -1.93
SNHG28P0DPA3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNHG28P0DPA3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 MIR27B-201ENST00000385129 97 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-325P-201ENST00000411132 105 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-607P-201ENST00000411283 108 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC009963.1-201ENST00000417265 157 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RPL21P38-201ENST00000418090 167 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 snoU13.3-201ENST00000459441 104 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC091179.1-201ENST00000461606 579 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 HMGN2P13-201ENST00000476476 274 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC022493.1-201ENST00000492984 337 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 GZMAP1-201ENST00000503054 631 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 SNORA25.11-201ENST00000515935 105 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-677P-201ENST00000516914 101 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-897P-201ENST00000517135 105 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RNU6-111P-201ENST00000517179 105 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC103783.1-201ENST00000520506 373 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms