Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR4782-201ENST00000577987 79 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AL356280.1-201ENST00000603614 379 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC092747.3-201ENST00000603769 301 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC091152.3-201ENST00000604227 325 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 FAM157A-202ENST00000615155 405 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 uc_338.15-201ENST00000615470 191 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.135-201ENST00000363439 95 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 SNORD113-7-201ENST00000363762 77 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 RNU6-715P-201ENST00000365204 103 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 EIF4E2P1-201ENST00000393781 255 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MIR1302-11-201ENST00000408051 138 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MIR1302-9-201ENST00000408365 138 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MIR1302-10-201ENST00000408734 138 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AC005534.2-201ENST00000431047 433 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 CR769767.1-201ENST00000436337 346 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 RNU2-69P-201ENST00000516061 100 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 RNU6-189P-201ENST00000516120 101 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 SNORA31.6-201ENST00000516241 130 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 MIR1302-2-201ENST00000607096 138 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AL359757.2-201ENST00000624309 274 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 AC080128.1-201ENST00000474389 1917 ntBASIC2.74□□□□□ -1.97
DDX43Q9NXZ2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1252P-201ENST00000363054 104 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP126-201ENST00000365092 109 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 SNORA4.3-201ENST00000365564 137 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 SNORD42.2-201ENST00000365570 69 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 SNORD70.1-201ENST00000391007 85 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 CISD1P1-201ENST00000393907 327 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RN7SKP158-201ENST00000410453 326 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RN7SKP284-201ENST00000411002 343 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC087884.1-201ENST00000469738 328 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.682-201ENST00000516457 100 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNU6-572P-201ENST00000516724 80 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNU6-256P-201ENST00000516747 97 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 RNU6-566P-201ENST00000516790 107 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC025755.1-201ENST00000521306 278 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AL157871.3-201ENST00000557231 293 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC020661.2-201ENST00000560114 134 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 FRG2DP-202ENST00000566967 323 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 MIR1273C-201ENST00000578669 77 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC023043.2-201ENST00000589678 1026 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AL138889.2-201ENST00000603883 242 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 MIR15A-201ENST00000607334 83 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 MIR6134-201ENST00000617606 109 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 AC243829.7-201ENST00000633081 225 ntBASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX43Q9NXZ2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNU6-371P-201ENST00000364283 108 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.431-201ENST00000384086 102 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP219-201ENST00000390940 113 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MIR548F5-201ENST00000408421 86 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1025P-201ENST00000410629 104 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AL160275.3-201ENST00000423876 471 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 PTGES3P4-201ENST00000426243 356 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MTCO2P12-201ENST00000427426 682 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MTND1P17-201ENST00000448961 204 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 FABP5P13-201ENST00000452144 328 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNU7-152P-201ENST00000458982 64 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNU7-167P-201ENST00000459160 62 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC117503.1-201ENST00000472241 394 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RPS27P27-201ENST00000498779 255 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 TRBVA-201ENST00000498804 316 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 MTND5P5-201ENST00000503764 376 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP320-201ENST00000516263 124 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1069P-201ENST00000516612 133 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 SNORA31.19-201ENST00000517079 126 ntBASIC2.72□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.718-201ENST00000517110 102 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms