Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU4-15P-201ENST00000362613 141 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 MIR504-201ENST00000385065 83 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AL357139.1-201ENST00000407792 426 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 C1DP2-201ENST00000418167 426 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 HMGB1P18-201ENST00000438801 619 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 MTND2P4-201ENST00000445034 1004 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 RAP1BP2-201ENST00000478270 544 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC116562.3-201ENST00000506136 177 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-548P-201ENST00000517083 115 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC068587.5-201ENST00000528506 175 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 RPL21P5-201ENST00000554662 472 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC005786.1-201ENST00000588553 154 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC009159.2-201ENST00000617603 606 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 AC130454.1-201ENST00000622948 401 ntBASIC1.43□□□□□ -2.18
CCNB1IP1Q9NPC3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-527P-201ENST00000363425 104 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-105P-201ENST00000363909 104 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU2-8P-201ENST00000410727 190 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 NCOR1P3-201ENST00000420479 303 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AL669831.1-202ENST00000428504 417 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 TAF9P1-201ENST00000445421 515 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 EPS15P1-201ENST00000448836 336 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 TAF9P2-201ENST00000454958 515 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU1-131P-201ENST00000458943 161 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AC022447.4-201ENST00000504053 364 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AC021146.2-201ENST00000504736 556 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AP005597.4-201ENST00000526762 229 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AC103987.3-201ENST00000582071 292 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AL034555.1-201ENST00000604816 211 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 AC104073.3-201ENST00000610942 955 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 MIR8074-201ENST00000615081 81 ntBASIC1.42□□□□□ -2.18
CCNB1IP1Q9NPC3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 SNORD115-7-201ENST00000365306 82 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6-169P-201ENST00000365336 107 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 SNORA20.2-201ENST00000383922 131 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 HMGN2P18-201ENST00000450680 270 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC132942.1-201ENST00000486753 483 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 MTND2P32-201ENST00000521584 1038 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC005771.1-201ENST00000585581 349 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC008752.3-201ENST00000588113 712 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 AC097372.5-201ENST00000623665 376 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 LINC02555-201ENST00000563933 1951 ntBASIC1.41□□□□□ -2.18
CCNB1IP1Q9NPC3 RNY1P12-201ENST00000364251 105 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 OR6C66P-201ENST00000414917 930 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 MTCO1P44-201ENST00000441935 243 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AC130509.1-201ENST00000464158 433 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AC025465.3-201ENST00000510570 311 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 MTND3P5-201ENST00000512798 333 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AC074344.1-201ENST00000512823 224 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 RNA5SP490-201ENST00000517141 136 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CCNB1IP1Q9NPC3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms