Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC024581.2-201ENST00000619986 252 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRRC53A6NM62 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRRC53A6NM62 CBX3P1-201ENST00000325243 554 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RNU6-529P-201ENST00000363383 104 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RNA5SP456-201ENST00000364002 114 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 Y_RNA.279-201ENST00000364763 95 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RNU6-510P-201ENST00000391239 108 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC138393.2-201ENST00000414742 246 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 UBE2V1P4-201ENST00000425374 344 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RPS15AP10-201ENST00000432472 382 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC008526.1-201ENST00000509149 338 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 RNA5SP112-201ENST00000515937 99 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 SCARNA3-201ENST00000517097 143 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 SNORA70.24-201ENST00000517233 118 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC087241.2-201ENST00000535801 324 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC023043.2-201ENST00000589678 1026 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 BNIP3P22-201ENST00000593399 556 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC005858.4-201ENST00000623191 700 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC244517.12-201ENST00000623581 663 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 AC007336.1-201ENST00000576365 3828 ntBASIC2.68□□□□□ -1.98
LRRC53A6NM62 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LRRC53A6NM62 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.67□□□□□ -1.98
LRRC53A6NM62 MTND4P23-201ENST00000447723 1363 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 RNU6-1010P-201ENST00000362757 107 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 RNU6-486P-201ENST00000363116 107 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 Y_RNA.135-201ENST00000363439 95 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 Y_RNA.301-201ENST00000364990 103 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 SNORD116-11-201ENST00000383882 92 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 SNORA9-201ENST00000384215 133 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 RNU6-1106P-201ENST00000390845 107 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 RNU6-1245P-201ENST00000411130 106 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 RPL21P111-201ENST00000418453 477 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 BX276092.3-201ENST00000424182 230 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 MTCO3P46-201ENST00000425787 232 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 MTND4LP16-201ENST00000440828 295 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.67□□□□□ -1.98
LRRC53A6NM62 RPL39P29-201ENST00000447779 157 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 PMCHL2-203ENST00000457791 237 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC53A6NM62 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 SNORA20.3-201ENST00000516880 132 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.67□□□□□ -1.98
LRRC53A6NM62 AC105137.2-201ENST00000569073 466 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 VN1R107P-201ENST00000601784 209 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 AL160281.1-201ENST00000605307 311 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 AC104237.2-201ENST00000612456 443 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.67□□□□□ -1.98
LRRC53A6NM62 AL133216.2-202ENST00000634512 349 ntBASIC2.67□□□□□ -1.98
LRRC53A6NM62 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC53A6NM62 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 Y_RNA.40-201ENST00000362645 93 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RNU6-562P-201ENST00000362731 107 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 Y_RNA.303-201ENST00000364998 94 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RNU6-767P-201ENST00000384132 107 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RNU6-95P-201ENST00000384697 107 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RNU2-23P-201ENST00000410545 195 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 MTND3P8-201ENST00000412909 339 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 ARL5AP4-201ENST00000430731 512 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 SNAP23P1-201ENST00000433229 246 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 MTND1P11-201ENST00000456661 876 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RNU7-187P-201ENST00000458985 68 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 snoU13.22-201ENST00000459428 104 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RPL9P9-202ENST00000466501 579 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC018437.1-201ENST00000492214 406 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC096745.1-201ENST00000509945 370 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC53A6NM62 ELOCP29-201ENST00000588193 334 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 AL033523.1-201ENST00000605153 153 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 MIR7157-201ENST00000635801 60 ntBASIC2.66□□□□□ -1.98
LRRC53A6NM62 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC53A6NM62 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms