Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU6-123P-201ENST00000516163 102 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 SNORA31.18-201ENST00000517043 134 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 MIR3117-201ENST00000584034 78 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AL133255.1-201ENST00000606374 441 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC093913.1-201ENST00000614178 329 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AC103705.1-201ENST00000619013 241 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 U6.99-201ENST00000637524 83 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 HSPA8P4-201ENST00000511877 1920 ntBASIC2.78□□□□□ -1.97
DDX43Q9NXZ2 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.138-201ENST00000363462 102 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP68-201ENST00000363885 119 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 POLHP1-201ENST00000411806 470 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 CALM2P2-201ENST00000428512 440 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AL591704.1-201ENST00000432574 275 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AL161651.1-201ENST00000440882 223 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC011816.1-201ENST00000441346 546 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 RNU6-914P-201ENST00000516749 109 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1183P-201ENST00000517054 60 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AP005597.4-201ENST00000526762 229 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC090115.3-201ENST00000553218 849 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AC007938.3-201ENST00000604965 623 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 AL022345.1-201ENST00000607292 135 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 MIR6817-201ENST00000615588 66 ntBASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX43Q9NXZ2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 MIR449A-201ENST00000362113 91 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RNU6-254P-201ENST00000363377 107 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.399-201ENST00000383955 105 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 MIR548K-201ENST00000408406 116 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RPL19P1-201ENST00000411635 428 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 VN1R36P-201ENST00000414936 291 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC104058.1-201ENST00000448028 297 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RPS3P1-201ENST00000456781 192 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 SNORD19B-201ENST00000459623 84 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 GZMAP1-201ENST00000503054 631 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RNU6-1315P-201ENST00000517187 99 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 RANP3-201ENST00000530970 276 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AP000889.2-201ENST00000532684 490 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AL121821.2-201ENST00000556081 394 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC005668.1-201ENST00000571142 476 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 MIR3672-201ENST00000584290 82 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC005034.5-201ENST00000604219 466 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 AC064836.2-201ENST00000609491 462 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX43Q9NXZ2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.212-201ENST00000364177 102 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.326-201ENST00000365176 113 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.387-201ENST00000383918 102 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 SNORD116-29-201ENST00000384516 83 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC080125.1-201ENST00000414888 684 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 NDUFA5P4-201ENST00000436704 385 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 DYNLL1P5-201ENST00000467158 270 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 MTCO1P29-201ENST00000496868 288 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 Y_RNA.689-201ENST00000516589 107 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 SNORA25.17-201ENST00000517184 124 ntBASIC2.75□□□□□ -1.97
DDX43Q9NXZ2 AC009902.1-201ENST00000519351 183 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms