Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYN1P17600 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.95□□□□□ -1.78
SYN1P17600 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYN1P17600 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SYN1P17600 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SYN1P17600 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.95□□□□□ -1.78
SYN1P17600 SNORD116-18-201ENST00000383961 92 ntBASIC3.95□□□□□ -1.78
SYN1P17600 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
SYN1P17600 HMGB1P27-201ENST00000431429 603 ntBASIC3.95□□□□□ -1.78
SYN1P17600 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AC025554.1-201ENST00000505641 188 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.95□□□□□ -1.78
SYN1P17600 AC113155.1-201ENST00000511141 769 ntBASIC3.95□□□□□ -1.78
SYN1P17600 RNA5SP272-201ENST00000516095 111 ntBASIC3.95□□□□□ -1.78
SYN1P17600 RNY3P16-201ENST00000516338 101 ntBASIC3.95□□□□□ -1.78
SYN1P17600 RNU6-1073P-201ENST00000517182 106 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AC109479.2-201ENST00000517842 174 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.95□□□□□ -1.78
SYN1P17600 AC093023.1-201ENST00000547375 507 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.95□□□□□ -1.78
SYN1P17600 IGHVIII-44-202ENST00000636235 289 ntBASIC3.95□□□□□ -1.78
SYN1P17600 AP000553.6-201ENST00000641242 118 ntBASIC3.95□□□□□ -1.78
SYN1P17600 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYN1P17600 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYN1P17600 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
SYN1P17600 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SYN1P17600 LINC02471-203ENST00000641941 4752 ntBASIC3.95□□□□□ -1.78
SYN1P17600 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYN1P17600 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
SYN1P17600 OR4G2P-202ENST00000641004 1759 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYN1P17600 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SYN1P17600 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYN1P17600 Y_RNA.27-201ENST00000362540 103 ntBASIC3.94□□□□□ -1.78
SYN1P17600 SNORD113-8-201ENST00000363497 74 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNU6-923P-201ENST00000364753 107 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNU6-818P-201ENST00000364837 108 ntBASIC3.94□□□□□ -1.78
SYN1P17600 Y_RNA.439-201ENST00000384119 94 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNA5SP424-201ENST00000390988 115 ntBASIC3.94□□□□□ -1.78
SYN1P17600 MIR1290-201ENST00000408735 78 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNU6-325P-201ENST00000411132 105 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RPL23AP36-201ENST00000413895 458 ntBASIC3.94□□□□□ -1.78
SYN1P17600 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.94□□□□□ -1.78
SYN1P17600 NDUFB4P7-201ENST00000423198 363 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RPL27AP8-201ENST00000424277 446 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AL162725.1-201ENST00000435405 301 ntBASIC3.94□□□□□ -1.78
SYN1P17600 DAP3P1-201ENST00000441522 278 ntBASIC3.94□□□□□ -1.78
SYN1P17600 HSPE1P25-201ENST00000455484 251 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.94□□□□□ -1.78
SYN1P17600 COX6CP14-201ENST00000469580 174 ntBASIC3.94□□□□□ -1.78
SYN1P17600 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.94□□□□□ -1.78
SYN1P17600 AC093663.1-201ENST00000497190 394 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNU6-496P-201ENST00000516145 99 ntBASIC3.94□□□□□ -1.78
SYN1P17600 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.94□□□□□ -1.78
SYN1P17600 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.94□□□□□ -1.78
SYN1P17600 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AL360157.1-201ENST00000565962 87 ntBASIC3.94□□□□□ -1.78
SYN1P17600 CPDP1-201ENST00000579660 283 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AC136601.2-201ENST00000604356 474 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AL121917.1-203ENST00000605534 577 ntBASIC3.94□□□□□ -1.78
SYN1P17600 RNU6-85P-201ENST00000605989 107 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AC013412.1-201ENST00000610687 192 ntBASIC3.94□□□□□ -1.78
SYN1P17600 AC108706.1-201ENST00000611053 297 ntBASIC3.94□□□□□ -1.78
SYN1P17600 MIR7106-201ENST00000612419 65 ntBASIC3.94□□□□□ -1.78
SYN1P17600 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYN1P17600 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
SYN1P17600 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.94□□□□□ -1.78
SYN1P17600 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
SYN1P17600 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.93□□□□□ -1.78
SYN1P17600 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 MIR449A-201ENST00000362113 91 ntBASIC3.93□□□□□ -1.78
SYN1P17600 SNORA31-201ENST00000362607 130 ntBASIC3.93□□□□□ -1.78
SYN1P17600 Y_RNA.44-201ENST00000362676 108 ntBASIC3.93□□□□□ -1.78
SYN1P17600 RNU6-7-201ENST00000364784 107 ntBASIC3.93□□□□□ -1.78
SYN1P17600 RNU6-8-201ENST00000365467 107 ntBASIC3.93□□□□□ -1.78
SYN1P17600 RNU6-937P-201ENST00000384325 106 ntBASIC3.93□□□□□ -1.78
SYN1P17600 MIR186-201ENST00000384988 86 ntBASIC3.93□□□□□ -1.78
SYN1P17600 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.93□□□□□ -1.78
SYN1P17600 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.93□□□□□ -1.78
SYN1P17600 AC006028.1-201ENST00000438379 402 ntBASIC3.93□□□□□ -1.78
SYN1P17600 AL049874.1-201ENST00000489560 388 ntBASIC3.93□□□□□ -1.78
SYN1P17600 AC097462.2-201ENST00000504623 481 ntBASIC3.93□□□□□ -1.78
SYN1P17600 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.93□□□□□ -1.78
SYN1P17600 SNORA72.7-201ENST00000516349 94 ntBASIC3.93□□□□□ -1.78
SYN1P17600 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.93□□□□□ -1.78
SYN1P17600 AL591516.1-201ENST00000611326 274 ntBASIC3.93□□□□□ -1.78
SYN1P17600 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.93□□□□□ -1.78
SYN1P17600 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SYN1P17600 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
SYN1P17600 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
SYN1P17600 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYN1P17600 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
SYN1P17600 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYN1P17600 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms