Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC009127.3-201ENST00000570531 403 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC078795.2-201ENST00000602835 1252 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC008121.3-201ENST00000618726 433 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC022418.1-201ENST00000624118 445 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-37P-201ENST00000362692 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-78P-201ENST00000362897 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 SNORD56.1-201ENST00000362913 68 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-11P-201ENST00000364234 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-25P-201ENST00000383873 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-1-201ENST00000383898 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-48P-201ENST00000384161 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-36P-201ENST00000384172 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-4P-201ENST00000384205 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-5P-201ENST00000384238 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-3P-201ENST00000384314 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-16P-201ENST00000384385 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-15P-201ENST00000384534 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-2-201ENST00000384627 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-29P-201ENST00000384637 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-9-201ENST00000384776 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-33P-201ENST00000384793 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL606923.1-201ENST00000406616 190 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 BTF3P7-201ENST00000407097 488 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 MTCO3P41-201ENST00000414801 328 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL589823.1-201ENST00000429577 183 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RPL23AP49-201ENST00000492925 468 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC008549.1-201ENST00000512900 643 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNA5SP281-201ENST00000516504 135 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC078814.3-201ENST00000553036 491 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-6P-201ENST00000606623 107 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC073534.2-201ENST00000620377 381 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC068792.1-201ENST00000621354 417 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 RMST_7.1-201ENST00000621935 268 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AC124864.2-201ENST00000624736 186 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 AL160394.1-201ENST00000624765 724 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
ATG4BQ9Y4P1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ATG4BQ9Y4P1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
ATG4BQ9Y4P1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 MTCO3P40-201ENST00000392516 676 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 OR9R1P-201ENST00000412200 877 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 MTND1P23-201ENST00000416931 372 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 FDX1P2-201ENST00000450769 375 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 snoU13.14-201ENST00000459372 104 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 TRBV12-1-201ENST00000479785 344 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AP001025.1-201ENST00000486139 332 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AP003034.1-201ENST00000534621 422 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC073410.2-201ENST00000603240 332 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AL713866.2-201ENST00000603579 219 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC002044.1-201ENST00000606707 158 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC017083.3-201ENST00000609955 700 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 U2.17-201ENST00000611454 95 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 uc_338.34-201ENST00000617467 174 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 AC097372.5-201ENST00000623665 376 ntBASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATG4BQ9Y4P1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 CALM2P3-201ENST00000400429 449 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms