Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC43Q96MW1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC43Q96MW1 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
CCDC43Q96MW1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CCDC43Q96MW1 AC097372.5-201ENST00000623665 376 ntBASIC2.21□□□□□ -2.06
CCDC43Q96MW1 SEPT14P19-203ENST00000633205 211 ntBASIC2.21□□□□□ -2.06
CCDC43Q96MW1 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
CCDC43Q96MW1 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.06
CCDC43Q96MW1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC43Q96MW1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 U3.4-201ENST00000363352 213 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RNU6-282P-201ENST00000365357 103 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 SNORA40.19-201ENST00000390846 128 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AL512604.1-201ENST00000404812 257 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RNU6-248P-201ENST00000410720 107 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AC079448.1-201ENST00000449377 373 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RPL23AP3-201ENST00000453844 468 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 MTND3P7-201ENST00000474435 343 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RPL30P1-201ENST00000488676 339 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 SNORD27.1-201ENST00000516319 72 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RNU6-965P-201ENST00000516721 96 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 RNA5SP503-201ENST00000517047 117 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AP000873.5-201ENST00000533906 236 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AC245014.2-201ENST00000603689 287 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AC246785.4-201ENST00000605374 287 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AC063943.3-201ENST00000615562 356 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 AL132822.1-201ENST00000617063 513 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 Z69720.2-201ENST00000624755 279 ntBASIC2.2□□□□□ -2.06
CCDC43Q96MW1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC43Q96MW1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 MIR544A-201ENST00000384855 91 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AL121890.1-201ENST00000435457 205 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 RPS29P15-201ENST00000458329 171 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC145350.1-201ENST00000567426 208 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC008749.1-201ENST00000597650 306 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AL590229.1-201ENST00000603497 542 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 AC063944.3-201ENST00000609969 533 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 U4.7-201ENST00000638126 106 ntBASIC2.19□□□□□ -2.06
CCDC43Q96MW1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-37P-201ENST00000362692 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 Y_RNA.201-201ENST00000364052 96 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-11P-201ENST00000364234 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-25P-201ENST00000383873 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-1-201ENST00000383898 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-48P-201ENST00000384161 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-36P-201ENST00000384172 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-4P-201ENST00000384205 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-5P-201ENST00000384238 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-611P-201ENST00000384276 104 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-3P-201ENST00000384314 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-16P-201ENST00000384385 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-15P-201ENST00000384534 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-2-201ENST00000384627 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-29P-201ENST00000384637 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-9-201ENST00000384776 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RNU6-33P-201ENST00000384793 107 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AL079342.1-201ENST00000401460 267 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 USP9YP18-201ENST00000425912 695 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AL669831.1-202ENST00000428504 417 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AL596276.1-201ENST00000434465 418 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 GTF2IP13-201ENST00000438487 386 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AC010095.1-201ENST00000443543 144 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 MTCO3P28-201ENST00000513351 515 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 RN7SKP256-201ENST00000517201 314 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AC022616.8-201ENST00000533569 253 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC43Q96MW1 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
CCDC43Q96MW1 Z94722.1-201ENST00000604328 474 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms