Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
KLF4O43474 AL117339.2-201ENST00000430475 180 ntBASIC3.68□□□□□ -1.82
KLF4O43474 AC073910.1-201ENST00000445047 438 ntBASIC3.68□□□□□ -1.82
KLF4O43474 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.68□□□□□ -1.82
KLF4O43474 snoU13.6-201ENST00000458785 104 ntBASIC3.68□□□□□ -1.82
KLF4O43474 RPS29P12-201ENST00000460178 152 ntBASIC3.68□□□□□ -1.82
KLF4O43474 AP000870.1-201ENST00000472927 406 ntBASIC3.68□□□□□ -1.82
KLF4O43474 RPL31P41-201ENST00000477967 372 ntBASIC3.68□□□□□ -1.82
KLF4O43474 AL049830.2-201ENST00000480072 201 ntBASIC3.68□□□□□ -1.82
KLF4O43474 SEM1P1-201ENST00000506694 209 ntBASIC3.68□□□□□ -1.82
KLF4O43474 RNU6-1143P-201ENST00000516125 104 ntBASIC3.68□□□□□ -1.82
KLF4O43474 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.68□□□□□ -1.82
KLF4O43474 AL137843.1-201ENST00000605078 385 ntBASIC3.68□□□□□ -1.82
KLF4O43474 AL121655.1-201ENST00000605811 308 ntBASIC3.68□□□□□ -1.82
KLF4O43474 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.68□□□□□ -1.82
KLF4O43474 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KLF4O43474 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
KLF4O43474 AC026241.1-201ENST00000517873 2142 ntBASIC3.68□□□□□ -1.82
KLF4O43474 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
KLF4O43474 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.68□□□□□ -1.82
KLF4O43474 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
KLF4O43474 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
KLF4O43474 RNA5SP322-201ENST00000363617 119 ntBASIC3.67□□□□□ -1.82
KLF4O43474 SNORD115-8-201ENST00000363856 82 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNU6-879P-201ENST00000364328 108 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNA5SP130-201ENST00000364431 114 ntBASIC3.67□□□□□ -1.82
KLF4O43474 SNORD115-38-201ENST00000365037 82 ntBASIC3.67□□□□□ -1.82
KLF4O43474 U8.10-201ENST00000384260 133 ntBASIC3.67□□□□□ -1.82
KLF4O43474 Y_RNA.471-201ENST00000384312 102 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNU1-89P-201ENST00000384592 164 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNU6-1093P-201ENST00000391194 107 ntBASIC3.67□□□□□ -1.82
KLF4O43474 MTCYBP9-201ENST00000431021 303 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.67□□□□□ -1.82
KLF4O43474 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.67□□□□□ -1.82
KLF4O43474 RPL27AP5-201ENST00000469428 449 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RPL29P14-201ENST00000495837 428 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC110794.1-201ENST00000505816 425 ntBASIC3.67□□□□□ -1.82
KLF4O43474 BTF3L4P4-201ENST00000506381 449 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNU2-53P-201ENST00000516257 147 ntBASIC3.67□□□□□ -1.82
KLF4O43474 SNORA40.15-201ENST00000516884 107 ntBASIC3.67□□□□□ -1.82
KLF4O43474 RNU6-58P-201ENST00000517143 103 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.67□□□□□ -1.82
KLF4O43474 AP002770.2-201ENST00000543613 532 ntBASIC3.67□□□□□ -1.82
KLF4O43474 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.67□□□□□ -1.82
KLF4O43474 AC027176.1-201ENST00000560204 514 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC103810.1-201ENST00000579873 453 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC011471.1-201ENST00000585766 187 ntBASIC3.67□□□□□ -1.82
KLF4O43474 AC005296.1-201ENST00000616145 209 ntBASIC3.67□□□□□ -1.82
KLF4O43474 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.67□□□□□ -1.82
KLF4O43474 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KLF4O43474 AP003122.5-201ENST00000527668 3766 ntBASIC3.66□□□□□ -1.82
KLF4O43474 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.66□□□□□ -1.82
KLF4O43474 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 Y_RNA.47-201ENST00000362697 108 ntBASIC3.66□□□□□ -1.82
KLF4O43474 Y_RNA.210-201ENST00000364161 110 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
KLF4O43474 CBX3P9-201ENST00000402326 552 ntBASIC3.66□□□□□ -1.82
KLF4O43474 SDAD1P3-201ENST00000427380 333 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AC091286.1-201ENST00000431233 461 ntBASIC3.66□□□□□ -1.82
KLF4O43474 RPL23AP22-201ENST00000437556 453 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.66□□□□□ -1.82
KLF4O43474 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.66□□□□□ -1.82
KLF4O43474 AC034114.1-201ENST00000520293 285 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.66□□□□□ -1.82
KLF4O43474 AC034105.4-201ENST00000568304 277 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AL356575.1-201ENST00000603008 283 ntBASIC3.66□□□□□ -1.82
KLF4O43474 AL078605.1-201ENST00000603529 500 ntBASIC3.66□□□□□ -1.82
KLF4O43474 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.66□□□□□ -1.82
KLF4O43474 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.66□□□□□ -1.82
KLF4O43474 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.66□□□□□ -1.82
KLF4O43474 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.66□□□□□ -1.82
KLF4O43474 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.66□□□□□ -1.82
KLF4O43474 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.66□□□□□ -1.82
KLF4O43474 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KLF4O43474 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KLF4O43474 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
KLF4O43474 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
KLF4O43474 RNU6-222P-201ENST00000362438 107 ntBASIC3.65□□□□□ -1.83
KLF4O43474 Y_RNA.276-201ENST00000364732 109 ntBASIC3.65□□□□□ -1.83
KLF4O43474 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.65□□□□□ -1.83
KLF4O43474 RNU6-713P-201ENST00000384761 107 ntBASIC3.65□□□□□ -1.83
KLF4O43474 Y_RNA.574-201ENST00000384766 95 ntBASIC3.65□□□□□ -1.83
KLF4O43474 RNU6-159P-201ENST00000391080 106 ntBASIC3.65□□□□□ -1.83
KLF4O43474 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.65□□□□□ -1.83
KLF4O43474 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
KLF4O43474 AIMP1P2-201ENST00000425294 312 ntBASIC3.65□□□□□ -1.83
KLF4O43474 AC083863.1-201ENST00000438811 231 ntBASIC3.65□□□□□ -1.83
KLF4O43474 RPS15AP7-201ENST00000439294 405 ntBASIC3.65□□□□□ -1.83
KLF4O43474 RPS3P1-201ENST00000456781 192 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms