Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-1183P-201ENST00000517054 60 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 MTND4P33-201ENST00000556706 766 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 MIR3973-201ENST00000579824 107 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 MIR4295-201ENST00000585286 85 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AC091152.3-201ENST00000604227 325 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AL355297.2-201ENST00000604792 129 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AC121334.2-201ENST00000605387 271 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AL136313.1-201ENST00000624804 202 ntBASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.36□□□□□ -2.19
SHANK3Q9BYB0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 Z75746.1-201ENST00000440243 2080 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 XKRYP1-201ENST00000423438 492 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 EIF4EP4-201ENST00000424916 578 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 XKRYP2-201ENST00000432915 492 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 BTF3P15-201ENST00000455606 336 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 SNORA31.25-201ENST00000517242 134 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 CBX3P8-201ENST00000532412 525 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 RNU6-83P-201ENST00000384568 112 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 RNU6-636P-201ENST00000384598 107 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR301A-201ENST00000385261 86 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR936-201ENST00000401264 98 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 PIGPP2-201ENST00000411569 458 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 PCMTD1P2-201ENST00000565017 355 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC012435.1-202ENST00000568772 240 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR1273C-201ENST00000578669 77 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR4287-201ENST00000579398 78 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR4999-201ENST00000585029 91 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC087045.1-201ENST00000605856 382 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC106052.1-201ENST00000608029 497 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AP000240.1-201ENST00000609910 452 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AL031667.3-201ENST00000620124 655 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 MIR6513-201ENST00000621188 64 ntBASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SHANK3Q9BYB0 AC073343.1-201ENST00000328239 651 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 RNU6-960P-201ENST00000364056 120 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 RNU6-188P-201ENST00000364207 107 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 SMIM11P1-201ENST00000369586 178 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 MIR147B-201ENST00000390185 80 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 RNU2-63P-201ENST00000410792 194 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 RPL37P21-201ENST00000435890 276 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AL353706.1-201ENST00000436728 494 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AL161651.1-201ENST00000440882 223 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 KATNBL1P6-201ENST00000453433 915 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC112771.1-201ENST00000463581 102 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC023194.1-201ENST00000493084 308 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AP006587.4-201ENST00000526053 529 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AP003072.2-201ENST00000527756 676 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC023050.2-201ENST00000544968 387 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AC034229.4-201ENST00000607861 441 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AL391834.2-201ENST00000609982 546 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 MIR6134-201ENST00000617606 109 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 AP000484.1-201ENST00000620067 1252 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 MTND5P42-201ENST00000637720 498 ntBASIC1.34□□□□□ -2.2
SHANK3Q9BYB0 SNORD114-19-201ENST00000363072 75 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 RNU6-529P-201ENST00000363383 104 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 RNU6-512P-201ENST00000364438 103 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 RNU6-769P-201ENST00000384407 104 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 SNORD115.1-201ENST00000391109 76 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC009518.2-201ENST00000418056 731 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 MTND1P32-201ENST00000433043 938 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 CR769776.1-201ENST00000441254 787 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC003071.1-201ENST00000451219 789 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 OR6C5P-201ENST00000452388 923 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms