Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EPHB3P54753 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 ZNF962P-201ENST00000443465 3140 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.89□□□□□ -1.79
EPHB3P54753 Y_RNA.44-201ENST00000362676 108 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RNU4-90P-201ENST00000362773 141 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RNA5SP72-201ENST00000364442 117 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RNU6-937P-201ENST00000384325 106 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 MIR513A2-201ENST00000385249 127 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.89□□□□□ -1.79
EPHB3P54753 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.89□□□□□ -1.79
EPHB3P54753 RN7SL293P-201ENST00000481765 281 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RPL21P13-201ENST00000488305 481 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RPL7P47-201ENST00000497299 556 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RNU7-175P-201ENST00000515915 61 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 RNA5SP208-201ENST00000516156 78 ntBASIC3.89□□□□□ -1.79
EPHB3P54753 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.89□□□□□ -1.79
EPHB3P54753 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.89□□□□□ -1.79
EPHB3P54753 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.89□□□□□ -1.79
EPHB3P54753 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.89□□□□□ -1.79
EPHB3P54753 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
EPHB3P54753 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
EPHB3P54753 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 SNORA31-201ENST00000362607 130 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 RNU6-227P-201ENST00000362865 103 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 RNA5SP189-201ENST00000364920 115 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 SNORD50B-201ENST00000364995 70 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 Y_RNA.504-201ENST00000384481 104 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 HLFP1-201ENST00000402375 499 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 RNU2-20P-201ENST00000410425 191 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.88□□□□□ -1.79
EPHB3P54753 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.88□□□□□ -1.79
EPHB3P54753 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.88□□□□□ -1.79
EPHB3P54753 CYCSP35-201ENST00000451978 304 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 RNU7-87P-201ENST00000459343 62 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.88□□□□□ -1.79
EPHB3P54753 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.88□□□□□ -1.79
EPHB3P54753 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.88□□□□□ -1.79
EPHB3P54753 AP004242.1-201ENST00000533701 349 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 AC005476.1-201ENST00000554427 397 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
EPHB3P54753 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.88□□□□□ -1.79
EPHB3P54753 AC090617.3-201ENST00000573670 475 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 MIR3922-201ENST00000585192 84 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 AP000553.6-201ENST00000641242 118 ntBASIC3.88□□□□□ -1.79
EPHB3P54753 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
EPHB3P54753 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
EPHB3P54753 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.88□□□□□ -1.79
EPHB3P54753 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.88□□□□□ -1.79
EPHB3P54753 AL365440.1-201ENST00000436135 2167 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 NCAPGP1-201ENST00000505112 1814 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 RNU6-1020P-201ENST00000363684 107 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 RNU6-81P-201ENST00000365608 104 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EPHB3P54753 RNU6-629P-201ENST00000384061 103 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 MIR183-201ENST00000384958 110 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 MIR607-201ENST00000385241 96 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 Y_RNA.623-201ENST00000411128 95 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.87□□□□□ -1.79
EPHB3P54753 CYP4F29P-201ENST00000420685 446 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.87□□□□□ -1.79
EPHB3P54753 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AL627311.1-201ENST00000431514 115 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.87□□□□□ -1.79
EPHB3P54753 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
EPHB3P54753 AC109925.1-201ENST00000478069 331 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 RPL31P13-201ENST00000484151 370 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 HMGB1P22-201ENST00000505315 124 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AK3P2-201ENST00000507976 429 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 RNU7-200P-201ENST00000516105 62 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.87□□□□□ -1.79
EPHB3P54753 AC023824.2-201ENST00000566185 400 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.87□□□□□ -1.79
EPHB3P54753 MIR4659A-201ENST00000580269 81 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AC008121.1-201ENST00000603244 268 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 AL590240.4-201ENST00000616908 390 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EPHB3P54753 U6.106-201ENST00000636360 105 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 U6.105-201ENST00000637379 88 ntBASIC3.87□□□□□ -1.79
EPHB3P54753 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EPHB3P54753 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EPHB3P54753 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EPHB3P54753 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
EPHB3P54753 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms