Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RNVU1-3-201ENST00000364313 161 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RNU6-806P-201ENST00000365147 105 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 DEFB109C-201ENST00000382575 264 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 DEFB109B-201ENST00000382656 264 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RPL23AP33-201ENST00000442301 452 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 BX276092.4-201ENST00000452056 248 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC008571.1-201ENST00000467232 300 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC015911.1-201ENST00000495111 156 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC116655.1-201ENST00000508324 901 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 RANP3-201ENST00000530970 276 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 MIR3941-201ENST00000582572 103 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AL158032.1-201ENST00000605401 106 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 U2.17-201ENST00000611454 95 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 PISRT1.1-201ENST00000616930 107 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 AC138627.2-201ENST00000624202 601 ntBASIC3.13□□□□□ -1.91
SNHG28P0DPA3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNHG28P0DPA3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 SNORD62.1-201ENST00000362541 86 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNU6-263P-201ENST00000363811 107 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNY3P11-201ENST00000364153 102 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNU6-99P-201ENST00000364721 107 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNU1-115P-201ENST00000365329 160 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RPL21P1-201ENST00000399532 476 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RPS15AP10-201ENST00000432472 382 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 HMGN2P21-201ENST00000447764 270 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC112492.4-201ENST00000456549 352 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC008481.1-201ENST00000463278 396 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RPL23AP55-201ENST00000498163 452 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC104136.1-201ENST00000512969 394 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNU6-408P-201ENST00000515910 100 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 CR383656.7-201ENST00000548164 174 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC025423.5-201ENST00000550230 219 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 AC002044.1-201ENST00000606707 158 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 SNHG22-203ENST00000617833 660 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 MTND5P27-201ENST00000428871 1720 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SNHG28P0DPA3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.12□□□□□ -1.91
SNHG28P0DPA3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AL603908.1-201ENST00000406098 201 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RNU6-101P-201ENST00000410323 104 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RNU2-23P-201ENST00000410545 195 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RNU6-847P-201ENST00000411115 108 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RNU6-387P-201ENST00000411331 105 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 FABP5P13-201ENST00000452144 328 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RPS3P1-201ENST00000456781 192 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 RN7SL432P-201ENST00000484057 298 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC105758.1-201ENST00000506038 399 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 SNORD116.3-201ENST00000517176 78 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC023157.2-201ENST00000540596 141 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 AC012119.1-201ENST00000603184 222 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 ELOCP5-201ENST00000604924 333 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 MIR8062-201ENST00000621515 85 ntBASIC3.11□□□□□ -1.91
SNHG28P0DPA3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNHG28P0DPA3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms