Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 EEF1B2P7-201ENST00000451177 676 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RNU6-953P-201ENST00000459154 107 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RNU7-180P-201ENST00000459240 63 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RPL31P58-201ENST00000469001 379 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AL160314.1-201ENST00000490836 438 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC139453.3-201ENST00000493276 369 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
HDAC3O15379 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AP005902.1-201ENST00000521358 186 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AP003122.3-201ENST00000526316 255 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC084851.1-201ENST00000529105 249 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC010525.2-201ENST00000590920 195 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 SDR42E1P4-201ENST00000620894 481 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.17□□□□□ -2.06
HDAC3O15379 AL512643.1-201ENST00000635735 524 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDAC3O15379 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HDAC3O15379 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HDAC3O15379 SNORD3E-201ENST00000362899 217 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 Y_RNA.573-201ENST00000384763 105 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 MIR578-201ENST00000384828 96 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 MT-TL1-201ENST00000386347 75 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 RNU6-876P-201ENST00000391295 104 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 FGF7P8-201ENST00000402994 292 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 RNU6-1148P-201ENST00000410992 104 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.16□□□□□ -2.06
HDAC3O15379 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HDAC3O15379 AC138393.2-201ENST00000414742 246 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AL139413.1-201ENST00000421309 217 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC099548.1-201ENST00000421443 426 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.16□□□□□ -2.06
HDAC3O15379 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.16□□□□□ -2.06
HDAC3O15379 AL360271.2-201ENST00000447710 161 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.16□□□□□ -2.06
HDAC3O15379 SNORA59A-201ENST00000459326 152 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC107626.1-201ENST00000471084 183 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 MTCO2P30-201ENST00000503662 364 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.16□□□□□ -2.06
HDAC3O15379 AC105417.1-201ENST00000514691 285 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.16□□□□□ -2.06
HDAC3O15379 RNU6-1038P-201ENST00000516516 104 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 RNA5SP165-201ENST00000517142 115 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC009902.1-201ENST00000519351 183 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 RANP3-201ENST00000530970 276 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 ADI1P3-201ENST00000549509 470 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AL118558.2-201ENST00000556294 238 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 MIR4424-201ENST00000585257 86 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.16□□□□□ -2.06
HDAC3O15379 AL670379.4-201ENST00000605279 254 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC004805.2-201ENST00000605382 482 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AC107294.1-201ENST00000609524 467 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 AL359547.2-201ENST00000615810 418 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 U6.114-201ENST00000636407 96 ntBASIC2.16□□□□□ -2.06
HDAC3O15379 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HDAC3O15379 AL136360.1-201ENST00000503377 1900 ntBASIC2.15□□□□□ -2.06
HDAC3O15379 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.15□□□□□ -2.06
HDAC3O15379 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HDAC3O15379 MTND4P27-201ENST00000450813 1354 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HDAC3O15379 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HDAC3O15379 NACAP2-201ENST00000318548 624 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RNU6-1287P-201ENST00000362914 107 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RNU6-140P-201ENST00000384566 108 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RNU6-1127P-201ENST00000384580 107 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RNU6-1060P-201ENST00000384664 107 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AL356776.1-201ENST00000406574 447 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 SNRPEP10-201ENST00000420249 274 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AL669831.1-202ENST00000428504 417 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 MYL8P-204ENST00000431574 518 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 GPM6BP2-201ENST00000432046 144 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 GTF2IP13-201ENST00000438487 386 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 GPM6BP1-201ENST00000446387 144 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 MTATP6P7-201ENST00000453315 681 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.15□□□□□ -2.07
HDAC3O15379 AC018710.1-201ENST00000506509 158 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 SNORA20.3-201ENST00000516880 132 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 RPL7P20-201ENST00000520308 745 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AC118273.2-201ENST00000532092 465 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AL121579.1-201ENST00000555129 305 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.15□□□□□ -2.07
HDAC3O15379 MIR4672-201ENST00000583126 81 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AC174048.1-201ENST00000603389 144 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC3O15379 AL161423.1-201ENST00000613700 262 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.15□□□□□ -2.07
HDAC3O15379 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms