Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 Y_RNA.327-201ENST00000365201 102 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR19B1-201ENST00000384829 87 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR301A-201ENST00000385261 86 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 UBE2V1P15-201ENST00000407776 448 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AL357139.1-201ENST00000407792 426 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC009518.2-201ENST00000418056 731 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 TIMM9P1-201ENST00000436122 256 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 MTND4P25-201ENST00000441039 533 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU7-59P-201ENST00000459101 61 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 HMGN2P9-201ENST00000476875 229 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AL163540.1-201ENST00000485382 386 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC009646.1-201ENST00000510455 318 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-1225P-201ENST00000516336 65 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 CR383656.8-201ENST00000549046 145 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AL731537.2-201ENST00000561565 951 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR4293-201ENST00000584305 78 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AL358072.1-201ENST00000604156 575 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AL445435.1-201ENST00000604232 665 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AP000654.2-201ENST00000605633 586 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC063943.3-201ENST00000615562 356 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 RMST_4.1-201ENST00000616886 107 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 AC231657.1-201ENST00000624313 397 ntBASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-942P-201ENST00000363002 107 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-1284P-201ENST00000363701 100 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 Y_RNA.332-201ENST00000365271 113 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR19A-201ENST00000384878 82 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-817P-201ENST00000391083 104 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 FGF7P8-201ENST00000402994 292 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AL079342.2-201ENST00000403367 482 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC003071.1-201ENST00000451219 789 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC024589.1-201ENST00000512207 263 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU5A-4P-201ENST00000516588 111 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNA5SP503-201ENST00000517047 117 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-64P-201ENST00000517119 105 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC136628.3-201ENST00000521868 290 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AP000889.1-201ENST00000530968 660 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR3664-201ENST00000579074 99 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 MTCO2P2-201ENST00000591258 225 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR6857-201ENST00000613267 93 ntBASIC0.53□□□□□ -2.32
TRAV13-1A0A0B4J241 AC245060.5-201ENST00000610778 3293 ntBASIC0.53□□□□□ -2.33
TRAV13-1A0A0B4J241 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6-53P-201ENST00000365367 106 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 MIR194-1-201ENST00000384892 85 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 MIR222-201ENST00000384992 110 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6-1025P-201ENST00000410629 104 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AL158053.1-201ENST00000441503 453 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 ARL2BPP4-201ENST00000506854 471 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6-150P-201ENST00000516237 95 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 RNA5SP481-201ENST00000516814 122 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 MTCO3P15-201ENST00000526563 574 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 VN1R107P-201ENST00000601784 209 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AL590229.1-201ENST00000603497 542 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC008945.2-201ENST00000606056 604 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AC112204.3-201ENST00000623822 332 ntBASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV13-1A0A0B4J241 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 MIR608-201ENST00000384820 100 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU2-7P-201ENST00000410794 178 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 MTND5P15-201ENST00000434246 349 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 NEFMP1-201ENST00000443423 1006 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 AC244505.5-201ENST00000443639 207 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 SNORA31.16-201ENST00000516773 139 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 RNA5SP490-201ENST00000517141 136 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6-1315P-201ENST00000517187 99 ntBASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV13-1A0A0B4J241 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms