Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
CCNB1IP1Q9NPC3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCNB1IP1Q9NPC3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.58□□□□□ -2.16
CCNB1IP1Q9NPC3 RPS3AP36-201ENST00000398190 775 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 Y_RNA.608-201ENST00000410647 95 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 RPL30P1-201ENST00000488676 339 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC104564.1-201ENST00000493028 407 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC010587.1-201ENST00000505809 469 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-965P-201ENST00000516721 96 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AL359999.1-201ENST00000604513 294 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC009318.2-201ENST00000610917 651 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AC099842.1-201ENST00000619919 596 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 RMST_7.1-201ENST00000621935 268 ntBASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCNB1IP1Q9NPC3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-371P-201ENST00000364283 108 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 SNORA24.1-201ENST00000384401 135 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RPS15AP10-201ENST00000432472 382 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AL354941.1-201ENST00000438600 464 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 USP9YP15-201ENST00000442391 422 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RPL30P6-201ENST00000475925 342 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RN7SL429P-201ENST00000479090 223 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RN7SL489P-201ENST00000486185 223 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RN7SL327P-201ENST00000488659 223 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 MTND3P3-201ENST00000505004 126 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 MTCO3P9-201ENST00000506989 781 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU1-86P-201ENST00000516108 154 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU1-107P-201ENST00000516617 154 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AP005660.1-201ENST00000522972 293 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AP003181.2-201ENST00000528941 181 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AL354943.1-201ENST00000572103 781 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR3945-201ENST00000581853 98 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 CYP2C61P-201ENST00000604072 290 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC105129.3-201ENST00000605455 485 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC005014.3-201ENST00000605985 190 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AL022345.1-201ENST00000607292 135 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-87P-201ENST00000607561 108 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 RN7SL853P-201ENST00000617250 223 ntBASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCNB1IP1Q9NPC3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU5F-6P-201ENST00000362979 116 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR558-201ENST00000384920 94 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 MTCYBP36-201ENST00000404146 440 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC007283.2-201ENST00000424739 197 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 MED13P1-201ENST00000428342 171 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 CBX3P6-201ENST00000430257 527 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AL365184.2-201ENST00000431139 435 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC119618.1-201ENST00000434191 222 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 RPS24P1-201ENST00000438550 371 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AL590365.1-201ENST00000450788 243 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-311P-201ENST00000516224 102 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR5697-201ENST00000578045 78 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AL136363.2-201ENST00000604173 851 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC138749.5-201ENST00000611461 208 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC116165.2-201ENST00000616705 206 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 AL157786.1-207ENST00000627771 695 ntBASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.55□□□□□ -2.16
CCNB1IP1Q9NPC3 SNORD56.1-201ENST00000362913 68 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-501P-201ENST00000364072 100 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-925P-201ENST00000384629 104 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 RAP1BP3-201ENST00000407180 549 ntBASIC1.54□□□□□ -2.16
CCNB1IP1Q9NPC3 MIR1294-201ENST00000408503 142 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms