Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU1-140P-201ENST00000365040 165 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 Y_RNA.445-201ENST00000384168 102 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 RNU6-692P-201ENST00000384496 107 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 MIR544A-201ENST00000384855 91 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NKX6-1P78426 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX6-1P78426 BX276092.3-201ENST00000424182 230 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 AC007969.2-201ENST00000441891 191 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 Y_RNA.631-201ENST00000459607 101 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 RPS29P27-201ENST00000463711 170 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX6-1P78426 AC068781.1-201ENST00000488231 618 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 AC093663.1-201ENST00000497190 394 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.25□□□□□ -1.89
NKX6-1P78426 RNU6-976P-201ENST00000516086 111 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 CKS1BP7-201ENST00000522230 235 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.25□□□□□ -1.89
NKX6-1P78426 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX6-1P78426 AC105137.2-201ENST00000569073 466 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 MIR3186-201ENST00000577404 85 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
NKX6-1P78426 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 MTND5P9-201ENST00000503854 1755 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
NKX6-1P78426 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX6-1P78426 CEP170P1-201ENST00000502249 4587 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NKX6-1P78426 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
NKX6-1P78426 RNU6-490P-201ENST00000362985 107 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 Y_RNA.123-201ENST00000363338 102 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 MIR184-201ENST00000384962 84 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 HLFP1-201ENST00000402375 499 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 MIR548P-201ENST00000408336 84 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 RNU6-55P-201ENST00000411092 107 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AC096664.2-201ENST00000411843 406 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX6-1P78426 RPL21P40-201ENST00000428586 483 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 ARF4P2-201ENST00000430209 526 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 AC011816.1-201ENST00000441346 546 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 OSTCP8-201ENST00000445117 448 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 BX510359.1-201ENST00000456973 237 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 MIR2053-201ENST00000459295 91 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX6-1P78426 RPS29P2-201ENST00000479278 136 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 FO393415.2-201ENST00000480085 343 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AC022493.2-201ENST00000506122 481 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 RNU6-470P-201ENST00000515954 104 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX6-1P78426 7SK.7-201ENST00000603504 247 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AC007742.2-201ENST00000618226 398 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 AC007792.1-201ENST00000623023 402 ntBASIC3.24□□□□□ -1.89
NKX6-1P78426 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NKX6-1P78426 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
NKX6-1P78426 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX6-1P78426 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX6-1P78426 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NKX6-1P78426 Y_RNA.138-201ENST00000363462 102 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 RNA5SP267-201ENST00000364893 126 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 Y_RNA.395-201ENST00000383945 109 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 RNU6-784P-201ENST00000384330 106 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 AC138623.1-201ENST00000418060 216 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 EIF1AXP1-201ENST00000419267 435 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX6-1P78426 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 RNA5SP208-201ENST00000516156 78 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 RN7SKP57-201ENST00000517248 293 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 SNRPGP18-201ENST00000553000 214 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 AC090897.2-201ENST00000581715 130 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX6-1P78426 uc_338.14-201ENST00000613162 166 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 HMGB1P24-202ENST00000615653 685 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 MIR3651-201ENST00000630427 90 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 AC110079.1-202ENST00000635213 138 ntBASIC3.23□□□□□ -1.89
NKX6-1P78426 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX6-1P78426 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
NKX6-1P78426 AC091564.4-201ENST00000533934 2194 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NKX6-1P78426 ZNF299P-201ENST00000406845 1804 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NKX6-1P78426 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
NKX6-1P78426 RNU6-142P-201ENST00000384019 107 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 RNU6-1222P-201ENST00000384615 107 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 MIR559-201ENST00000385188 96 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 AL358075.3-201ENST00000426289 226 ntBASIC3.22□□□□□ -1.89
NKX6-1P78426 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX6-1P78426 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX6-1P78426 RPL39P29-201ENST00000447779 157 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms