Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 SUMO2P6-201ENST00000505273 288 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN4AP35499 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN4AP35499 AP003181.2-201ENST00000528941 181 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AP003122.4-201ENST00000530980 758 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AC093012.1-202ENST00000549403 582 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 ZNF321P-202ENST00000550843 495 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN4AP35499 HMGN1P30-201ENST00000589286 268 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AC068276.1-201ENST00000605793 379 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 AC022893.3-201ENST00000607665 437 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SCN4AP35499 AL162373.1-201ENST00000620433 407 ntBASIC1.64□□□□□ -2.15
SCN4AP35499 Y_RNA.374-201ENST00000365606 101 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RNU6-19P-201ENST00000384718 107 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RNA5SP111-201ENST00000411386 101 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 ELOCP4-201ENST00000420090 333 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN4AP35499 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 RPS15AP5-201ENST00000436276 388 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.63□□□□□ -2.15
SCN4AP35499 MTND5P2-201ENST00000442927 1142 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RPS3AP22-201ENST00000488297 769 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RPL39P36-201ENST00000490784 156 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC113155.1-201ENST00000511141 769 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC009902.1-201ENST00000519351 183 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC022634.1-201ENST00000520765 532 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC007834.2-201ENST00000536310 343 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.63□□□□□ -2.15
SCN4AP35499 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC091965.4-201ENST00000607691 587 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 MTND5P42-201ENST00000637720 498 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 U8.3-201ENST00000363321 132 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 Y_RNA.205-201ENST00000364128 113 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RNU6-61P-201ENST00000365528 109 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 PGBD4P6-201ENST00000421501 610 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RPL36AP53-201ENST00000432891 316 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RPL7P34-201ENST00000433316 712 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC004383.1-201ENST00000438135 289 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 NEFMP1-201ENST00000443423 1006 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 EPS15P1-201ENST00000448836 336 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.63□□□□□ -2.15
SCN4AP35499 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.63□□□□□ -2.15
SCN4AP35499 RPL36AP48-201ENST00000485521 314 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 FABP5P5-201ENST00000515537 406 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 RNU7-51P-201ENST00000516560 62 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN4AP35499 MIR1273C-201ENST00000578669 77 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC011712.1-201ENST00000588959 234 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC008945.2-201ENST00000606056 604 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 U6.42-201ENST00000618440 107 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 MIR7157-201ENST00000635801 60 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 MIR7515-201ENST00000637837 67 ntBASIC1.63□□□□□ -2.15
SCN4AP35499 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN4AP35499 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SCN4AP35499 RNU6-511P-201ENST00000363496 107 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 RNU6-461P-201ENST00000364195 107 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 RNU6-748P-201ENST00000384648 107 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 Y_RNA.608-201ENST00000410647 95 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN4AP35499 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN4AP35499 DDX3P2-201ENST00000446138 111 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN4AP35499 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.62□□□□□ -2.15
SCN4AP35499 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AC010587.1-201ENST00000505809 469 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN4AP35499 RNU6-1315P-201ENST00000517187 99 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 MTATP6P15-201ENST00000527233 835 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AC011979.2-201ENST00000527568 352 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SCN4AP35499 AC137800.2-201ENST00000574375 120 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AC005730.3-201ENST00000583067 366 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 MIR3117-201ENST00000584034 78 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AP000403.1-201ENST00000603349 851 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AL391646.1-201ENST00000603860 190 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 BCRP9-201ENST00000605312 388 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 AC108747.1-201ENST00000609508 535 ntBASIC1.62□□□□□ -2.15
SCN4AP35499 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SCN4AP35499 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCN4AP35499 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SCN4AP35499 RNU5F-6P-201ENST00000362979 116 ntBASIC1.61□□□□□ -2.15
SCN4AP35499 RNY1P12-201ENST00000364251 105 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 586.8 ms