Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 ELOCP5-201ENST00000604924 333 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC026585.1-201ENST00000619582 524 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 RNU4-21P-201ENST00000362802 126 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 RNU6-387P-201ENST00000411331 105 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 TOMM20P4-201ENST00000427861 435 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC009961.2-201ENST00000435771 251 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 HMGB1P31-201ENST00000437242 427 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 USP9YP8-201ENST00000441913 500 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 RPL23AP7-203ENST00000449021 469 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AL118520.1-201ENST00000450770 291 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 snoU109.1-201ENST00000459339 135 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 OR5AL2P-201ENST00000532185 920 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC137800.2-201ENST00000574375 120 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AP001486.3-201ENST00000615334 372 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AC138649.3-201ENST00000622154 254 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 AL031601.2-202ENST00000622650 282 ntBASIC2.31□□□□□ -2.04
CCDC43Q96MW1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC43Q96MW1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC43Q96MW1 SNORD56.1-201ENST00000362913 68 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 MT-TH-201ENST00000387441 69 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 HMGN2P39-201ENST00000398005 273 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AL445567.1-201ENST00000439121 144 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 PSPHP1-201ENST00000450062 261 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC006026.2-201ENST00000457376 180 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC060788.1-201ENST00000521318 469 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC43Q96MW1 IGKV3-31-201ENST00000523109 329 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC43Q96MW1 LRRC34P1-201ENST00000542742 915 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC43Q96MW1 MIR4529-201ENST00000578110 78 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC090897.2-201ENST00000581715 130 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC073539.2-201ENST00000597113 165 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 RMST_7.1-201ENST00000621935 268 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 AC008993.2-201ENST00000631744 806 ntBASIC2.3□□□□□ -2.04
CCDC43Q96MW1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC43Q96MW1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RNU6-655P-201ENST00000362858 107 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RNA5SP138-201ENST00000365098 114 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC43Q96MW1 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RNA5SP390-201ENST00000410191 113 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RNU2-23P-201ENST00000410545 195 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 OR6C66P-201ENST00000414917 930 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AL022238.1-201ENST00000442557 355 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RPL30P12-201ENST00000474666 353 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AL121594.1-201ENST00000475906 575 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AP002453.2-201ENST00000533503 320 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 MIR98-201ENST00000606724 119 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AP001506.1-201ENST00000615444 211 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 AL603755.1-201ENST00000619504 163 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 U6.114-201ENST00000636407 96 ntBASIC2.29□□□□□ -2.04
CCDC43Q96MW1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 MTND5P17-201ENST00000418405 1603 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 RNU6-212P-201ENST00000362642 104 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 Y_RNA.367-201ENST00000365544 101 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 RAP1BP3-201ENST00000407180 549 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 RPL31P35-201ENST00000431058 377 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 RPL38P4-201ENST00000502376 214 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC43Q96MW1 MTCO3P9-201ENST00000506989 781 ntBASIC2.28□□□□□ -2.04
CCDC43Q96MW1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 283.4 ms