Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-6P-201ENST00000606623 107 ntBASIC3.95□□□□□ -1.78
EPHB3P54753 Y_RNA.772-201ENST00000606692 102 ntBASIC3.95□□□□□ -1.78
EPHB3P54753 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
EPHB3P54753 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.95□□□□□ -1.78
EPHB3P54753 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.95□□□□□ -1.78
EPHB3P54753 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.95□□□□□ -1.78
EPHB3P54753 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
EPHB3P54753 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
EPHB3P54753 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.94□□□□□ -1.78
EPHB3P54753 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 IPO8P1-201ENST00000455509 3109 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
EPHB3P54753 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.94□□□□□ -1.78
EPHB3P54753 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 MIR93-201ENST00000385024 80 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
EPHB3P54753 AL592148.1-201ENST00000413568 445 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.94□□□□□ -1.78
EPHB3P54753 AC004552.1-201ENST00000419089 348 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.94□□□□□ -1.78
EPHB3P54753 COX6CP14-201ENST00000469580 174 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 RPS26P3-201ENST00000470205 348 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC090543.2-201ENST00000483963 348 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.94□□□□□ -1.78
EPHB3P54753 AC004057.1-201ENST00000485827 348 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 SEPT14P8-201ENST00000508026 178 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.94□□□□□ -1.78
EPHB3P54753 RNU6-496P-201ENST00000516145 99 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 RNU6-143P-201ENST00000516942 93 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 SCARNA24.2-201ENST00000516968 130 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 RNA5SP471-201ENST00000516971 106 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.94□□□□□ -1.78
EPHB3P54753 AC024405.2-202ENST00000532731 184 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC004024.1-201ENST00000549244 247 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.94□□□□□ -1.78
EPHB3P54753 SNRPGP15-201ENST00000600149 222 ntBASIC3.94□□□□□ -1.78
EPHB3P54753 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
EPHB3P54753 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.94□□□□□ -1.78
EPHB3P54753 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.94□□□□□ -1.78
EPHB3P54753 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
EPHB3P54753 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
EPHB3P54753 UBE3AP2-201ENST00000429033 2259 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AL359854.1-201ENST00000614203 1594 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
EPHB3P54753 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
EPHB3P54753 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
EPHB3P54753 MIR412-201ENST00000362142 91 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 MIR208A-201ENST00000362287 71 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 Y_RNA.76-201ENST00000362931 109 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 U3.6-201ENST00000363622 211 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 MIR218-2-201ENST00000385006 110 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.93□□□□□ -1.78
EPHB3P54753 AL079342.1-201ENST00000401460 267 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AC017079.2-201ENST00000416102 485 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 COX6CP10-201ENST00000416832 224 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AL353748.1-201ENST00000440753 474 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.93□□□□□ -1.78
EPHB3P54753 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 SNORD105B-201ENST00000458770 79 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 RPS29P27-201ENST00000463711 170 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 RPL23AP45-201ENST00000476406 468 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AC110768.1-201ENST00000509222 400 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
EPHB3P54753 AC023141.12-201ENST00000512399 199 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 RNU6-1012P-201ENST00000516606 109 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.93□□□□□ -1.78
EPHB3P54753 AC084851.1-201ENST00000529105 249 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.93□□□□□ -1.78
EPHB3P54753 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.93□□□□□ -1.78
EPHB3P54753 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.93□□□□□ -1.78
EPHB3P54753 SDAD1P2-201ENST00000441308 2028 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
EPHB3P54753 AC009812.4-201ENST00000569134 1805 ntBASIC3.93□□□□□ -1.78
EPHB3P54753 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
EPHB3P54753 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
EPHB3P54753 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.92□□□□□ -1.78
EPHB3P54753 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.92□□□□□ -1.78
EPHB3P54753 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
EPHB3P54753 RNU5A-1-201ENST00000362698 116 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 SNORD113-8-201ENST00000363497 74 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 Y_RNA.170-201ENST00000363746 110 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 RNA5SP387-201ENST00000364226 106 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 RNU6-290P-201ENST00000365212 101 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 RNA5SP167-201ENST00000365461 116 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 SNORD50.2-201ENST00000365465 70 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 RNU6-102P-201ENST00000384485 104 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 MIR613-201ENST00000385248 95 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
EPHB3P54753 RNA5SP424-201ENST00000390988 115 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 SNORA11.1-201ENST00000408133 129 ntBASIC3.92□□□□□ -1.78
EPHB3P54753 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms