Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AC010378.1-201ENST00000619270 362 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-715P-201ENST00000365204 103 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-701P-201ENST00000384059 107 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-842P-201ENST00000384269 107 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 SNORD51-201ENST00000384320 80 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.476-201ENST00000384347 108 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-14P-201ENST00000384630 106 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RNU6-516P-201ENST00000411381 104 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC063976.3-201ENST00000426849 329 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC093151.1-201ENST00000427711 313 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 SNORD109B-201ENST00000458961 67 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 SNORD109A-201ENST00000459128 67 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RPL21P103-201ENST00000479921 488 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC005921.1-201ENST00000510589 286 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 MTND1P19-201ENST00000511780 315 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RN7SKP82-201ENST00000516786 223 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC005357.1-201ENST00000588399 301 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC011494.1-201ENST00000596454 237 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 RPL12P50-201ENST00000603116 116 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC009570.1-201ENST00000609599 745 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC078938.1-201ENST00000620993 318 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
SNHG28P0DPA3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
SNHG28P0DPA3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RNU6-472P-201ENST00000384299 107 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RNU6-823P-201ENST00000391042 103 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RNU6-754P-201ENST00000391166 107 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AL139039.1-201ENST00000401900 692 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 MIR548I3-201ENST00000408378 149 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 MIR548I1-201ENST00000408810 149 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 UBE2FP1-201ENST00000416536 447 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RPS15AP40-201ENST00000419621 391 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 DPH3P2-201ENST00000422618 250 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 SUMO1P2-201ENST00000452524 304 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 RPL37P6-202ENST00000464216 403 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC010631.1-201ENST00000474150 156 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 MIR3605-201ENST00000583214 100 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC008162.1-201ENST00000604718 254 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AL670379.4-201ENST00000605279 254 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 PRR13P7-201ENST00000605538 430 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC007619.2-201ENST00000605743 379 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 HMGB1P24-202ENST00000615653 685 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AL589994.2-201ENST00000621124 579 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 AC103710.2-202ENST00000641454 2853 ntBASIC3.17□□□□□ -1.9
SNHG28P0DPA3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNHG28P0DPA3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.106-201ENST00000363189 100 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RNU6-266P-201ENST00000364225 107 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RNU6-339P-201ENST00000384310 107 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNHG28P0DPA3 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 RPLP0P7-201ENST00000416050 667 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 HMGB1P9-201ENST00000429856 646 ntBASIC3.16□□□□□ -1.9
SNHG28P0DPA3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms