Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 EXOSC3P1-201ENST00000448649 500 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.23□□□□□ -2.21
SOD1P00441 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 SNRPFP4-201ENST00000456366 242 ntBASIC1.23□□□□□ -2.21
SOD1P00441 MED28P2-201ENST00000475771 317 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RPL36AP21-201ENST00000490372 323 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-970P-201ENST00000516312 107 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-677P-201ENST00000516914 101 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-1092P-201ENST00000516955 87 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-201P-201ENST00000517100 61 ntBASIC1.23□□□□□ -2.21
SOD1P00441 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.23□□□□□ -2.21
SOD1P00441 AC023050.2-201ENST00000544968 387 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 AC022254.1-201ENST00000567857 235 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 MIR4285-201ENST00000581001 85 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.23□□□□□ -2.21
SOD1P00441 RPL30P11-203ENST00000598995 310 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AL022154.1-201ENST00000604698 785 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC021755.4-201ENST00000616620 456 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC006338.1-201ENST00000618453 749 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AP000484.1-201ENST00000620067 1252 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AC092656.1-203ENST00000624134 423 ntBASIC1.23□□□□□ -2.21
SOD1P00441 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.23□□□□□ -2.21
SOD1P00441 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.23□□□□□ -2.21
SOD1P00441 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SOD1P00441 RNU5E-1-201ENST00000362477 120 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNU6-395P-201ENST00000365662 106 ntBASIC1.22□□□□□ -2.21
SOD1P00441 MIR122-201ENST00000385044 85 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNU6-1242P-201ENST00000391052 103 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNA5SP212-201ENST00000391223 107 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNU6-757P-201ENST00000410334 100 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AL353777.1-201ENST00000425552 326 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.22□□□□□ -2.21
SOD1P00441 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.22□□□□□ -2.21
SOD1P00441 AC084290.1-201ENST00000434995 374 ntBASIC1.22□□□□□ -2.21
SOD1P00441 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.22□□□□□ -2.21
SOD1P00441 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.22□□□□□ -2.21
SOD1P00441 AL139824.2-201ENST00000458731 1095 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RNU6-586P-201ENST00000517265 104 ntBASIC1.22□□□□□ -2.21
SOD1P00441 CYCSP27-201ENST00000527643 293 ntBASIC1.22□□□□□ -2.21
SOD1P00441 CR383656.8-201ENST00000549046 145 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
SOD1P00441 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.22□□□□□ -2.21
SOD1P00441 AC073410.2-201ENST00000603240 332 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AC073413.2-201ENST00000604332 360 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AL158042.1-201ENST00000605338 460 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AC013244.3-201ENST00000605614 388 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AL139022.2-201ENST00000606934 443 ntBASIC1.22□□□□□ -2.21
SOD1P00441 AC108747.1-201ENST00000609508 535 ntBASIC1.22□□□□□ -2.21
SOD1P00441 MIR3529-201ENST00000637713 78 ntBASIC1.22□□□□□ -2.21
SOD1P00441 RBBP8P1-201ENST00000449447 1844 ntBASIC1.22□□□□□ -2.21
SOD1P00441 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SOD1P00441 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SOD1P00441 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SOD1P00441 RNU6-529P-201ENST00000363383 104 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RNU6-157P-201ENST00000383957 107 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RNU6-1032P-201ENST00000384100 107 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RNU6-622P-201ENST00000384272 103 ntBASIC1.21□□□□□ -2.22
SOD1P00441 MIR186-201ENST00000384988 86 ntBASIC1.21□□□□□ -2.22
SOD1P00441 MIR29C-201ENST00000385231 88 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC016831.2-201ENST00000417179 352 ntBASIC1.21□□□□□ -2.22
SOD1P00441 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.21□□□□□ -2.22
SOD1P00441 EIF4EP2-201ENST00000422816 654 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 MTCO3P5-201ENST00000433620 714 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
SOD1P00441 PTENP1-201ENST00000447117 1215 ntBASIC1.21□□□□□ -2.22
SOD1P00441 NDUFB1P2-201ENST00000449477 176 ntBASIC1.21□□□□□ -2.22
SOD1P00441 HSPE1P24-201ENST00000450782 238 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RPL23AP35-201ENST00000451906 501 ntBASIC1.21□□□□□ -2.22
SOD1P00441 RNA5SP57-201ENST00000459463 123 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC006512.1-201ENST00000468816 291 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.21□□□□□ -2.22
SOD1P00441 AC092325.1-201ENST00000566449 554 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.21□□□□□ -2.22
SOD1P00441 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.21□□□□□ -2.22
SOD1P00441 AP000860.1-201ENST00000605250 559 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC130324.3-201ENST00000614165 542 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AL132822.1-201ENST00000617063 513 ntBASIC1.21□□□□□ -2.22
SOD1P00441 AC091304.6-201ENST00000619761 202 ntBASIC1.21□□□□□ -2.22
SOD1P00441 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.21□□□□□ -2.22
SOD1P00441 WWP1P1-201ENST00000466609 2769 ntBASIC1.2□□□□□ -2.22
SOD1P00441 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SOD1P00441 RNU6-946P-201ENST00000383878 107 ntBASIC1.2□□□□□ -2.22
SOD1P00441 RNU6-611P-201ENST00000384276 104 ntBASIC1.2□□□□□ -2.22
SOD1P00441 RNU6-636P-201ENST00000384598 107 ntBASIC1.2□□□□□ -2.22
SOD1P00441 RNA5SP465-201ENST00000391195 109 ntBASIC1.2□□□□□ -2.22
SOD1P00441 AP000275.1-201ENST00000411943 390 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms