Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX6-1P78426 HAUS6P2-201ENST00000433254 2404 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX6-1P78426 AC006504.1-201ENST00000562493 3666 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX6-1P78426 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 U8.8-201ENST00000365399 135 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 Y_RNA.473-201ENST00000384333 102 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 RNVU1-14-201ENST00000384770 164 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 HMGN2P8-201ENST00000391458 268 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 AL365496.1-201ENST00000426885 215 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AC005534.2-201ENST00000431047 433 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 RPL23AP50-201ENST00000434149 455 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 MTCO3P10-201ENST00000455912 772 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AL136097.1-201ENST00000456945 913 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AC005741.1-201ENST00000511094 432 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.31□□□□□ -1.88
NKX6-1P78426 RNA5SP164-201ENST00000516533 110 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 AC011471.1-201ENST00000585766 187 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.31□□□□□ -1.88
NKX6-1P78426 AL353621.2-201ENST00000605340 133 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX6-1P78426 MIR7975-201ENST00000619350 68 ntBASIC3.31□□□□□ -1.88
NKX6-1P78426 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX6-1P78426 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX6-1P78426 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX6-1P78426 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX6-1P78426 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX6-1P78426 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 IPO8P1-201ENST00000455509 3109 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 AC008669.1-201ENST00000565823 2178 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 RNU6-1059P-201ENST00000363752 98 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 Y_RNA.404-201ENST00000383978 102 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 RNU6-843P-201ENST00000384454 104 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 AP000907.1-201ENST00000428428 510 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 MTND3P9-201ENST00000429526 346 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX6-1P78426 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX6-1P78426 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 RNU6-1153P-201ENST00000516760 105 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 RNU6-264P-201ENST00000517134 104 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX6-1P78426 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX6-1P78426 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX6-1P78426 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX6-1P78426 AL355877.2-201ENST00000603670 358 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AC091152.3-201ENST00000604227 325 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AL080274.1-201ENST00000605565 220 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AC097372.5-201ENST00000623665 376 ntBASIC3.3□□□□□ -1.88
NKX6-1P78426 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX6-1P78426 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX6-1P78426 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX6-1P78426 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NKX6-1P78426 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX6-1P78426 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX6-1P78426 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNU6-1227P-201ENST00000383981 107 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNU6-842P-201ENST00000384269 107 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNU6-748P-201ENST00000384648 107 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NKX6-1P78426 SNORA75.6-201ENST00000391318 127 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AL591034.2-201ENST00000402839 359 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNU6-174P-201ENST00000410406 106 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AP000275.1-201ENST00000411943 390 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX6-1P78426 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX6-1P78426 RPL7P47-201ENST00000497299 556 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX6-1P78426 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms