Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NFKB1P19838 U3.19-201ENST00000390893 196 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 AL356387.2-201ENST00000422272 243 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 MTATP6P7-201ENST00000453315 681 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 RPL23AP14-201ENST00000468281 468 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 AC020593.1-201ENST00000507399 299 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.43□□□□□ -1.7
NFKB1P19838 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.43□□□□□ -1.7
NFKB1P19838 AC091895.1-201ENST00000624494 256 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NFKB1P19838 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NFKB1P19838 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NFKB1P19838 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NFKB1P19838 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NFKB1P19838 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NFKB1P19838 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NFKB1P19838 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NFKB1P19838 RNU6-449P-201ENST00000383914 107 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RNU6-211P-201ENST00000384047 107 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RNU6-1181P-201ENST00000384191 106 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 Y_RNA.488-201ENST00000384403 102 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RNU6-140P-201ENST00000384566 108 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 SNORA22C-201ENST00000384614 134 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RNU6-1168P-201ENST00000390831 104 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AC092047.1-201ENST00000424997 240 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AL358075.3-201ENST00000426289 226 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AC092017.2-201ENST00000427600 362 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 MARK2P15-201ENST00000432204 2186 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AL512844.2-201ENST00000433990 593 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 ABCF2P2-201ENST00000450549 296 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RPS29P33-201ENST00000456717 146 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AC097462.2-201ENST00000504623 481 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.42□□□□□ -1.7
NFKB1P19838 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.42□□□□□ -1.7
NFKB1P19838 AL133393.1-201ENST00000603277 287 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AL357075.2-201ENST00000614906 189 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 AC048347.1-201ENST00000624621 427 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 U2.21-201ENST00000637295 81 ntBASIC4.42□□□□□ -1.7
NFKB1P19838 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NFKB1P19838 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.42□□□□□ -1.7
NFKB1P19838 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NFKB1P19838 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NFKB1P19838 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NFKB1P19838 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFKB1P19838 RNU1-15P-201ENST00000353977 144 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 RNU1-140P-201ENST00000365040 165 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 SNORD116-20-201ENST00000384529 92 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 RNU6-658P-201ENST00000384606 106 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 SNORD66.1-201ENST00000391230 76 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC007969.2-201ENST00000441891 191 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.41□□□□□ -1.7
NFKB1P19838 HMGB3P3-201ENST00000510526 400 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 AC134698.5-201ENST00000519444 336 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC090281.1-201ENST00000523019 276 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 AC055872.1-201ENST00000570978 278 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC136624.4-201ENST00000573044 370 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 RN7SL176P-201ENST00000580352 264 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 MIR4715-201ENST00000584117 79 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC020895.1-201ENST00000595362 272 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AC068831.7-201ENST00000616954 363 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 MIR7154-201ENST00000620673 73 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 AP000346.3-201ENST00000622821 210 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 snoU18.1-201ENST00000629629 71 ntBASIC4.41□□□□□ -1.7
NFKB1P19838 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFKB1P19838 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NFKB1P19838 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NFKB1P19838 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFKB1P19838 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NFKB1P19838 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NFKB1P19838 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NFKB1P19838 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NFKB1P19838 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.4□□□□□ -1.7
NFKB1P19838 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NFKB1P19838 RNA5SP175-201ENST00000364275 119 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 Y_RNA.595-201ENST00000410403 105 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
NFKB1P19838 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 RPL23AP52-201ENST00000439311 478 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.4□□□□□ -1.71
NFKB1P19838 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AC015795.1-201ENST00000513669 327 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 RNU6-191P-201ENST00000516295 94 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 RNU1-103P-201ENST00000516502 125 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.4□□□□□ -1.71
NFKB1P19838 AC233702.2-202ENST00000562547 291 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.4□□□□□ -1.71
NFKB1P19838 AC113403.1-201ENST00000604910 193 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 AL021997.2-201ENST00000615674 271 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms