Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 SNRPGP17-201ENST00000603780 214 ntBASIC1.26□□□□□ -2.21
SOD1P00441 AC098614.4-201ENST00000607601 462 ntBASIC1.26□□□□□ -2.21
SOD1P00441 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.26□□□□□ -2.21
SOD1P00441 AC097478.2-201ENST00000610572 514 ntBASIC1.26□□□□□ -2.21
SOD1P00441 AP002371.2-201ENST00000624450 503 ntBASIC1.26□□□□□ -2.21
SOD1P00441 AC017037.3-201ENST00000625016 472 ntBASIC1.26□□□□□ -2.21
SOD1P00441 AL512643.1-201ENST00000635735 524 ntBASIC1.26□□□□□ -2.21
SOD1P00441 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU6-288P-201ENST00000363690 104 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU6-53P-201ENST00000365367 106 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU6-487P-201ENST00000365430 104 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU5E-6P-201ENST00000365574 115 ntBASIC1.25□□□□□ -2.21
SOD1P00441 SNORA8-201ENST00000384574 139 ntBASIC1.25□□□□□ -2.21
SOD1P00441 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SOD1P00441 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SOD1P00441 AL133475.1-201ENST00000404414 305 ntBASIC1.25□□□□□ -2.21
SOD1P00441 FCF1P10-201ENST00000407590 479 ntBASIC1.25□□□□□ -2.21
SOD1P00441 RNU2-62P-201ENST00000410868 191 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.25□□□□□ -2.21
SOD1P00441 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 AC244636.1-201ENST00000421152 228 ntBASIC1.25□□□□□ -2.21
SOD1P00441 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.25□□□□□ -2.21
SOD1P00441 RPS6P15-201ENST00000431996 751 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.25□□□□□ -2.21
SOD1P00441 AC092473.1-201ENST00000441098 221 ntBASIC1.25□□□□□ -2.21
SOD1P00441 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.25□□□□□ -2.21
SOD1P00441 AC087884.1-201ENST00000469738 328 ntBASIC1.25□□□□□ -2.21
SOD1P00441 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 AC108078.2-201ENST00000510750 236 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.25□□□□□ -2.21
SOD1P00441 AC013828.2-201ENST00000532487 235 ntBASIC1.25□□□□□ -2.21
SOD1P00441 IMMP1LP2-201ENST00000552954 492 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC026271.5-201ENST00000577873 130 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.25□□□□□ -2.21
SOD1P00441 ELOCP5-201ENST00000604924 333 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC018638.7-201ENST00000605836 1114 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC144521.1-201ENST00000607148 956 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC022893.3-201ENST00000607665 437 ntBASIC1.25□□□□□ -2.21
SOD1P00441 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 AL589994.2-201ENST00000621124 579 ntBASIC1.25□□□□□ -2.21
SOD1P00441 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.25□□□□□ -2.21
SOD1P00441 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.25□□□□□ -2.21
SOD1P00441 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
SOD1P00441 AP000560.1-201ENST00000624150 1937 ntBASIC1.25□□□□□ -2.21
SOD1P00441 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SOD1P00441 HAUS6P2-201ENST00000433254 2404 ntBASIC1.24□□□□□ -2.21
SOD1P00441 MIR126-201ENST00000362291 85 ntBASIC1.24□□□□□ -2.21
SOD1P00441 Y_RNA.4-201ENST00000362333 112 ntBASIC1.24□□□□□ -2.21
SOD1P00441 Y_RNA.46-201ENST00000362695 102 ntBASIC1.24□□□□□ -2.21
SOD1P00441 RNU6-960P-201ENST00000364056 120 ntBASIC1.24□□□□□ -2.21
SOD1P00441 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SOD1P00441 RNU6-843P-201ENST00000384454 104 ntBASIC1.24□□□□□ -2.21
SOD1P00441 ELOCP17-201ENST00000414751 326 ntBASIC1.24□□□□□ -2.21
SOD1P00441 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 AL591212.2-201ENST00000433923 257 ntBASIC1.24□□□□□ -2.21
SOD1P00441 USP9YP24-201ENST00000434374 697 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.24□□□□□ -2.21
SOD1P00441 AL357134.1-201ENST00000445848 426 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AL137159.1-201ENST00000452808 512 ntBASIC1.24□□□□□ -2.21
SOD1P00441 MTATP6P14-201ENST00000455189 673 ntBASIC1.24□□□□□ -2.21
SOD1P00441 snoU109.3-201ENST00000459477 145 ntBASIC1.24□□□□□ -2.21
SOD1P00441 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.24□□□□□ -2.21
SOD1P00441 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
SOD1P00441 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 RNU6-1003P-201ENST00000517099 105 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 DUXAP5-201ENST00000529668 529 ntBASIC1.24□□□□□ -2.21
SOD1P00441 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.24□□□□□ -2.21
SOD1P00441 AL157871.3-201ENST00000557231 293 ntBASIC1.24□□□□□ -2.21
SOD1P00441 MTCYBP23-201ENST00000558717 1102 ntBASIC1.24□□□□□ -2.21
SOD1P00441 MIR4307-201ENST00000582802 84 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.24□□□□□ -2.21
SOD1P00441 AC112187.2-201ENST00000604345 283 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC021646.1-201ENST00000605469 484 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC126118.1-201ENST00000607744 628 ntBASIC1.24□□□□□ -2.21
SOD1P00441 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SOD1P00441 FRG1KP-201ENST00000623592 341 ntBASIC1.24□□□□□ -2.21
SOD1P00441 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.24□□□□□ -2.21
SOD1P00441 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.24□□□□□ -2.21
SOD1P00441 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SOD1P00441 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.23□□□□□ -2.21
SOD1P00441 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
SOD1P00441 Y_RNA.33-201ENST00000362591 102 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-942P-201ENST00000363002 107 ntBASIC1.23□□□□□ -2.21
SOD1P00441 SNORD114-19-201ENST00000363072 75 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-931P-201ENST00000363850 107 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNY3P13-201ENST00000365542 102 ntBASIC1.23□□□□□ -2.21
SOD1P00441 SNORA75B-201ENST00000384053 137 ntBASIC1.23□□□□□ -2.21
SOD1P00441 MIR1283-2-201ENST00000408621 87 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU2-36P-201ENST00000410361 191 ntBASIC1.23□□□□□ -2.21
SOD1P00441 RNU6-1025P-201ENST00000410629 104 ntBASIC1.23□□□□□ -2.21
SOD1P00441 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SOD1P00441 AL022400.1-201ENST00000423946 935 ntBASIC1.23□□□□□ -2.21
SOD1P00441 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms