Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHS1O60500 RNU6-884P-201ENST00000363889 107 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 RNU4-9P-201ENST00000364951 139 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 RNY3P4-201ENST00000384428 101 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NPHS1O60500 RNA5SP44-201ENST00000410446 133 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.81□□□□□ -1.8
NPHS1O60500 AC016397.1-201ENST00000412463 242 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 YPEL5P1-201ENST00000419731 367 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 HMGN2P30-201ENST00000423237 256 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 AL591043.1-201ENST00000432461 424 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 AC243964.1-201ENST00000441814 261 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 AL031659.1-201ENST00000447075 539 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 AL590664.1-201ENST00000448065 339 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 snoU13.30-201ENST00000458951 104 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 RPL23AP14-201ENST00000468281 468 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
NPHS1O60500 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 RNA5SP468-201ENST00000516782 93 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHS1O60500 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.81□□□□□ -1.8
NPHS1O60500 AC136932.1-201ENST00000574771 208 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.81□□□□□ -1.8
NPHS1O60500 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 AL133383.2-201ENST00000622958 2336 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPHS1O60500 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHS1O60500 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 RNU6-222P-201ENST00000362438 107 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 RNU6-968P-201ENST00000384076 107 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 Y_RNA.439-201ENST00000384119 94 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 Y_RNA.515-201ENST00000384535 112 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPHS1O60500 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 RNU2-64P-201ENST00000411315 191 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 RPL26P27-201ENST00000414397 437 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHS1O60500 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHS1O60500 DNAJC19P7-201ENST00000428811 344 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHS1O60500 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHS1O60500 RPL30P1-201ENST00000488676 339 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 RPL23AP75-201ENST00000491601 451 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHS1O60500 AC091874.1-201ENST00000511402 339 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.8□□□□□ -1.8
NPHS1O60500 RN7SKP209-201ENST00000516888 304 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 RNU6-111P-201ENST00000517179 105 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHS1O60500 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.8□□□□□ -1.8
NPHS1O60500 AC090617.3-201ENST00000573670 475 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC010900.2-201ENST00000604508 210 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AC012468.1-201ENST00000604888 430 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 MIR6820-201ENST00000611508 62 ntBASIC3.8□□□□□ -1.8
NPHS1O60500 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.8□□□□□ -1.8
NPHS1O60500 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHS1O60500 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
NPHS1O60500 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NPHS1O60500 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPHS1O60500 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NPHS1O60500 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
NPHS1O60500 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHS1O60500 snoU2_19.2-201ENST00000363024 80 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPHS1O60500 MIR548I3-201ENST00000408378 149 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 MIR548I1-201ENST00000408810 149 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 RAB9AP3-201ENST00000412737 573 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 TMEM167AP1-201ENST00000423409 219 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AC009296.1-201ENST00000443146 155 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.79□□□□□ -1.8
NPHS1O60500 RAB9AP1-201ENST00000449393 573 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 HMGB3P8-201ENST00000449709 577 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AC006026.2-201ENST00000457376 180 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHS1O60500 RN7SKP83-201ENST00000516512 178 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 Y_RNA.713-201ENST00000517013 96 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 RNA5SP179-201ENST00000517284 121 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHS1O60500 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
NPHS1O60500 AC093023.1-201ENST00000547375 507 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHS1O60500 MIR4300-201ENST00000581016 96 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
NPHS1O60500 IPO5P1-202ENST00000600039 287 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms