Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX6-1P78426 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 CYCSP35-201ENST00000451978 304 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 ELOCP24-201ENST00000456370 334 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RN7SL93P-201ENST00000463035 293 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AC107626.1-201ENST00000471084 183 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AC027575.1-201ENST00000481064 460 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX6-1P78426 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX6-1P78426 BTF3L4P4-201ENST00000506381 449 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AC097473.1-201ENST00000508142 408 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AC010265.1-201ENST00000513509 211 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RNU6-612P-201ENST00000516909 102 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 SNORA31.18-201ENST00000517043 134 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AC087499.8-201ENST00000578406 226 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AC011494.1-201ENST00000596454 237 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 MIR3976-201ENST00000606807 139 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AC024581.2-201ENST00000619986 252 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX6-1P78426 U6.105-201ENST00000637379 88 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
NKX6-1P78426 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NKX6-1P78426 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NKX6-1P78426 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX6-1P78426 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX6-1P78426 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX6-1P78426 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX6-1P78426 RNU6-596P-201ENST00000365395 98 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 XGY1-201ENST00000381172 446 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 RNU6-310P-201ENST00000384655 107 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NKX6-1P78426 MTHFD2P2-201ENST00000407725 247 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 RNU2-49P-201ENST00000410666 184 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC011742.1-201ENST00000431448 434 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 ATP5HP2-201ENST00000433885 485 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AC007677.1-201ENST00000445757 515 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 FTH1P25-201ENST00000447665 469 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 MED28P2-201ENST00000475771 317 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 RPL7P42-201ENST00000481005 679 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 PTP4A1P4-201ENST00000512479 322 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AC093303.1-201ENST00000514549 295 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 SCARNA14-201ENST00000516903 136 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AC109446.1-201ENST00000566172 220 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.33□□□□□ -1.88
NKX6-1P78426 MIR8076-201ENST00000611401 83 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX6-1P78426 MIR8058-201ENST00000615737 89 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 AC090617.7-201ENST00000623952 126 ntBASIC3.33□□□□□ -1.88
NKX6-1P78426 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX6-1P78426 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
NKX6-1P78426 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX6-1P78426 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX6-1P78426 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AC010889.1-201ENST00000566193 2666 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 RNU6-227P-201ENST00000362865 103 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 RNU6-750P-201ENST00000390946 107 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 BTF3L4P2-201ENST00000392798 346 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 Y_RNA.646-201ENST00000410980 101 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AC074117.2-201ENST00000417130 397 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 SNORA59A-201ENST00000459326 152 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX6-1P78426 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 RNU6-1213P-201ENST00000517075 94 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX6-1P78426 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AL442663.2-201ENST00000554385 511 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AC093249.1-201ENST00000567049 203 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX6-1P78426 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX6-1P78426 AC019159.1-201ENST00000605094 187 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AL591424.2-201ENST00000617023 128 ntBASIC3.32□□□□□ -1.88
NKX6-1P78426 AC138627.2-201ENST00000624202 601 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms