Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC104058.1-201ENST00000448028 297 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC132479.1-201ENST00000449160 144 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC022364.2-201ENST00000457963 554 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC117503.1-201ENST00000472241 394 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC010493.1-201ENST00000513479 292 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 RNA5SP503-201ENST00000517047 117 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 ACA59.2-201ENST00000517061 156 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC010186.2-204ENST00000537668 439 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 MIR5571-201ENST00000577998 113 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AL138889.2-201ENST00000603883 242 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AL021997.1-201ENST00000605757 193 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC011155.2-201ENST00000623202 216 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC009161.2-201ENST00000624626 138 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 SEPT14P19-203ENST00000633205 211 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 OR6C66P-201ENST00000414917 930 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AL031779.1-201ENST00000415663 330 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RPL21P90-201ENST00000415692 466 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC016831.2-201ENST00000417179 352 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AL353621.1-201ENST00000418219 243 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MTCO3P30-201ENST00000426425 670 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 CALM2P2-201ENST00000428512 440 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AL627311.1-201ENST00000431514 115 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC000111.3-201ENST00000433478 193 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC004383.1-201ENST00000438135 289 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MTND1P29-201ENST00000448112 647 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 snoU109.2-201ENST00000459316 135 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 SNORD27.1-201ENST00000516319 72 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-685P-201ENST00000517088 95 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 RPL7P20-201ENST00000520308 745 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AP003392.2-201ENST00000527269 208 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC092325.1-201ENST00000566449 554 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC025449.1-201ENST00000603896 529 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC104237.2-201ENST00000612456 443 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC011890.2-201ENST00000613393 294 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AP001486.3-201ENST00000615334 372 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC048344.4-201ENST00000619744 527 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AC092656.1-203ENST00000624134 423 ntBASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4BQ9Y4P1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AC069528.2-201ENST00000624849 1991 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 RNU4-48P-201ENST00000365559 182 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 MIR10A-201ENST00000385043 110 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-550P-201ENST00000391057 101 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 RPS3AP44-201ENST00000425466 790 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AC073464.1-201ENST00000429823 534 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AL451074.3-201ENST00000437709 472 ntBASIC2.31□□□□□ -2.04
ATG4BQ9Y4P1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms