Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 VN1R91P-201ENST00000594377 169 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 MIR1244-1-201ENST00000612829 85 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 AC048347.1-201ENST00000624621 427 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 MIR1244-3-201ENST00000635744 85 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 MIR1244-2-201ENST00000636449 85 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 MIR1244-4-202ENST00000636813 85 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 ZNF299P-201ENST00000406845 1804 ntBASIC3.41□□□□□ -1.86
CPEB3Q8NE35 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CPEB3Q8NE35 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CPEB3Q8NE35 AC032011.1-201ENST00000611703 1549 ntBASIC3.4□□□□□ -1.86
CPEB3Q8NE35 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CPEB3Q8NE35 UBE3AP2-201ENST00000429033 2259 ntBASIC3.4□□□□□ -1.86
CPEB3Q8NE35 RNU6-595P-201ENST00000363944 107 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 Y_RNA.214-201ENST00000364201 112 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RNU1-64P-201ENST00000365443 163 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 DEFB109C-201ENST00000382575 264 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 DEFB109B-201ENST00000382656 264 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RPS3AP12-201ENST00000443616 753 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 OR2AQ1P-201ENST00000451972 200 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC013470.1-201ENST00000453438 462 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 MTCO3P8-201ENST00000453691 755 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 U8.21-201ENST00000459536 136 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RNY3P15-201ENST00000516297 97 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RNA5SP165-201ENST00000517142 115 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 RNU6-1231P-201ENST00000517185 103 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AP005902.1-201ENST00000521358 186 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC103996.1-201ENST00000555468 102 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC125232.2-201ENST00000592457 143 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC008121.1-201ENST00000603244 268 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 AC004852.3-201ENST00000614131 326 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 MIR8058-201ENST00000615737 89 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 ZNF826P-207ENST00000622273 1910 ntBASIC3.4□□□□□ -1.87
CPEB3Q8NE35 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPEB3Q8NE35 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AL359693.1-201ENST00000614959 2407 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 IPO8P1-201ENST00000455509 3109 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 MTND5P9-201ENST00000503854 1755 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 Y_RNA.222-201ENST00000364264 102 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RNU6-213P-201ENST00000384051 104 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RNU6-1026P-201ENST00000384465 108 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 Y_RNA.551-201ENST00000384661 102 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AC009310.1-201ENST00000414414 451 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 ELOCP20-201ENST00000422460 345 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 Z98949.2-201ENST00000440996 144 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RNU6-388P-201ENST00000517012 105 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RNU6-389P-201ENST00000517048 105 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AC023157.2-201ENST00000540596 141 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RAC1P9-201ENST00000604990 392 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 MIR8076-201ENST00000611401 83 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 MIR6875-201ENST00000617506 72 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 AC233263.6-201ENST00000631132 1963 ntBASIC3.39□□□□□ -1.87
CPEB3Q8NE35 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPEB3Q8NE35 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPEB3Q8NE35 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPEB3Q8NE35 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPEB3Q8NE35 Y_RNA.26-201ENST00000362539 101 ntBASIC3.38□□□□□ -1.87
CPEB3Q8NE35 RNU6-428P-201ENST00000362942 107 ntBASIC3.38□□□□□ -1.87
CPEB3Q8NE35 SNORD50.1-201ENST00000362987 71 ntBASIC3.38□□□□□ -1.87
CPEB3Q8NE35 U3.6-201ENST00000363622 211 ntBASIC3.38□□□□□ -1.87
CPEB3Q8NE35 RNA5SP515-201ENST00000364570 118 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms