Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC090517.1-201ENST00000569307 266 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC090617.3-201ENST00000573670 475 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 MIR5684-201ENST00000585074 65 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 AC015914.2-201ENST00000618167 288 ntBASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TMEM88BA6NKF7 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC104623.2-202ENST00000623477 4002 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 Y_RNA.19-201ENST00000362462 99 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 Y_RNA.214-201ENST00000364201 112 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 Y_RNA.512-201ENST00000384518 102 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 MIR153-2-201ENST00000385225 87 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RPL21P75-201ENST00000396599 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RPL21P28-201ENST00000401418 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 FTH1P15-201ENST00000406984 280 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AL590556.1-201ENST00000423231 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 SDAD1P3-201ENST00000427380 333 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RPL21P11-201ENST00000461458 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RPL21P39-201ENST00000463605 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RN7SL601P-201ENST00000471221 293 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC087190.1-201ENST00000484462 480 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC107032.1-201ENST00000485945 480 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC132942.1-201ENST00000486753 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC093591.1-201ENST00000491435 481 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RPL21P16-201ENST00000495531 483 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC016632.1-201ENST00000503994 196 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RNU6-408P-201ENST00000515910 100 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RNU6-397P-201ENST00000516226 104 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 RNU6-897P-201ENST00000517135 105 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AL355877.2-201ENST00000603670 358 ntBASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TMEM88BA6NKF7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AL731532.2-201ENST00000623542 1953 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 RNU1-140P-201ENST00000365040 165 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 RNY3P4-201ENST00000384428 101 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 MIR1179-201ENST00000408703 91 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 ELOCP20-201ENST00000422460 345 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 Z74021.1-201ENST00000423610 407 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AL441985.1-201ENST00000457727 251 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 RPL23AP75-201ENST00000491601 451 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 RNA5SP446-201ENST00000515955 82 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 SYF2P1-201ENST00000550658 413 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AL138880.2-201ENST00000616214 239 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AP000560.1-201ENST00000624150 1937 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AL031595.2-201ENST00000624215 19071 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 AC068254.2-201ENST00000623938 3577 ntBASIC4.75□□□□□ -1.65
TMEM88BA6NKF7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RNU6-1141P-201ENST00000364520 107 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RNA5SP97-201ENST00000365006 84 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RNU6-541P-201ENST00000384709 110 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 U3.26-201ENST00000391236 204 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AL139247.1-201ENST00000422768 325 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RPEP5-201ENST00000441137 268 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 snoU13.28-201ENST00000459235 104 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AL133162.1-201ENST00000463228 453 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 TOMM22P6-201ENST00000465035 409 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AP002884.2-201ENST00000471647 395 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RN7SKP18-201ENST00000516005 275 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 RNU6-1198P-201ENST00000516904 67 ntBASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.74□□□□□ -1.65
TMEM88BA6NKF7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 245.9 ms